RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 KIF24Q5T7B8 1368 aa4.72□□□□□ -1.65
CD44-220ENST00000525688 LTN1O94822 1766 aa4.72□□□□□ -1.65
CD44-220ENST00000525688 BRWD3Q6RI45 1802 aa4.72□□□□□ -1.65
CD44-220ENST00000525688 KIF20BQ96Q89 1820 aa4.72□□□□□ -1.65
CD44-220ENST00000525688 IL16Q14005 1332 aa4.72□□□□□ -1.65
CD44-220ENST00000525688 RGPD5Q99666 1765 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 ZMYM2Q9UBW7 1377 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 STMND1H3BQB6 276 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 O00370 1275 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 ATP2C2O75185 946 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 RECQL5O94762 991 aaPredicted RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 SLITRK3O94933 977 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 RB1P06400 928 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 MMP2P08253 660 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 CHRNB1P11230 501 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 PDGFRAP16234 1089 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 CHATP28329 748 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 AVPR1AP37288 418 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 ARHGAP25P42331 645 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 MAGEA4P43358 317 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 CAMLGP49069 296 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 ETV1P50549 477 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 GAD2Q05329 585 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 RIPK1Q13546 671 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 SNX1Q13596 522 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 RRS1Q15050 365 aaKnown RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 PDK1Q15118 436 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 IMMTQ16891 758 aaKnown RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 MYLK3Q32MK0 819 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 PCGF3Q3KNV8 242 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 CRY2Q49AN0 593 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 SLC39A12Q504Y0 691 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 XKR9Q5GH70 373 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 C10orf25Q5T742 122 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 SHEQ5VZ18 495 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 PMS2CLQ68D20 193 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 CTR9Q6PD62 1173 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 LCTLQ6UWM7 567 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 ISLR2Q6UXK2 745 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 QSOX2Q6ZRP7 698 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 MSANTD1Q6ZTZ1 278 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 TOM1L2Q6ZVM7 507 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 LINGO2Q7L985 606 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 YTHDF3Q7Z739 585 aaKnown RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 HACE1Q8IYU2 909 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 SIX6OS1Q8N1H7 587 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 HUS1BQ8NHY5 278 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 CCDC110Q8TBZ0 833 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 SUN5Q8TC36 379 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 TMEM18Q96B42 140 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 ZFYVE19Q96K21 471 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 CEP295NLQ96MC4 621 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 SORCS2Q96PQ0 1159 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 OR2A14Q96R47 310 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 PKP4Q99569 1192 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 SYT17Q9BSW7 474 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 MLPHQ9BV36 600 aaPredicted RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 GCOM2Q9BZD3 368 aaPredicted RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 DPH5Q9H2P9 285 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 VCPKMTQ9H867 229 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 RANGRFQ9HD47 186 aaPredicted RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 MBNL1Q9NR56 388 aaKnown RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 GLRX2Q9NS18 164 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 TMEM51Q9NW97 253 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 CWC15Q9P013 229 aaKnown RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 FBXL17Q9UF56 701 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 PCDHA12Q9UN75 941 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 RPH3AQ9Y2J0 694 aaPredicted RBP4.71□□□□□ -1.66
CD44-220ENST00000525688 CEPT1Q9Y6K0 416 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 DISP2A7MBM2 1401 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 MROH5Q6ZUA9 1318 aa4.71□□□□□ -1.66
CD44-220ENST00000525688 INSRP06213 1382 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 FLT4P35916 1363 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 NPC1L1Q9UHC9 1359 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 PEAK1Q9H792 1746 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 PARP4Q9UKK3 1724 aaKnown RBP4.7□□□□□ -1.66
CD44-220ENST00000525688 ANKRD26Q9UPS8 1709 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 A0A1W2PPC1 479 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 CTAGE15A4D2H0 777 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 LRRIQ4A6NIV6 560 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 LRRC72A6NJI9 287 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 OR6C76A6NM76 312 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 HNRNPCL2B2RXH8 293 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 L7N2F9 121 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 CTAGE5O15320 804 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 VEGFDO43915 354 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 NKX2-2O95096 273 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 STAMBPO95630 424 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 ASGR1P07306 291 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 TUBBP07437 444 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 CELA2AP08217 269 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 CTAGE8P0CG41 777 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 TPBGLP0DKB5 382 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 GHRP10912 638 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 CASTP20810 708 aaKnown RBP4.7□□□□□ -1.66
CD44-220ENST00000525688 MYF6P23409 242 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 PTPN3P26045 913 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 GNL1P36915 607 aaPredicted RBP4.7□□□□□ -1.66
CD44-220ENST00000525688 PPP3CCP48454 512 aa4.7□□□□□ -1.66
CD44-220ENST00000525688 LIG4P49917 911 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms