RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 ADNPQ9H2P0 1102 aa12.03□□□□□ -0.48
VEGFA-223ENST00000523125 SRMSQ9H3Y6 488 aa12.03□□□□□ -0.48
VEGFA-223ENST00000523125 TFB2MQ9H5Q4 396 aaKnown RBP12.03□□□□□ -0.48
VEGFA-223ENST00000523125 MVB12BQ9H7P6 319 aa12.03□□□□□ -0.48
VEGFA-223ENST00000523125 VPS37BQ9H9H4 285 aa12.03□□□□□ -0.48
VEGFA-223ENST00000523125 PDE7BQ9NP56 450 aa12.03□□□□□ -0.48
VEGFA-223ENST00000523125 RARRES3Q9UL19 164 aa12.03□□□□□ -0.48
VEGFA-223ENST00000523125 DRG1Q9Y295 367 aaKnown RBP12.03□□□□□ -0.48
VEGFA-223ENST00000523125 BTRCQ9Y297 605 aa12.03□□□□□ -0.48
VEGFA-223ENST00000523125 SLC5A10A0PJK1 596 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 BHMG1C9JSJ3 638 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-223ENST00000523125 E7EVH7 732 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 J3QKU1 62 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 BTN3A1O00481 513 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 OR1I1O60431 355 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 GOT2P00505 430 aaKnown RBP12.02□□□□□ -0.49
VEGFA-223ENST00000523125 NTRK1P04629 796 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 APRTP07741 180 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 FURINP09958 794 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 TPBGLP0DKB5 382 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 ADRA1DP25100 572 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 ACADLP28330 430 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 LMAN1P49257 510 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 POLE2P56282 527 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 NFKB2Q00653 900 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 ACY1Q03154 408 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 SEMA3AQ14563 771 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 ARMC6Q6NXE6 501 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 CYB5D1Q6P9G0 228 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 NAPRTQ6XQN6 538 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 PPP1R21Q6ZMI0 780 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 ADGRF3Q8IZF5 1079 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 CCDC89Q8N998 374 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 OR52E1Q8NGJ3 308 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 LCN9Q8WX39 176 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 TFGQ92734 400 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-223ENST00000523125 ZNF501Q96CX3 271 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-223ENST00000523125 SGSM3Q96HU1 749 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 LHX9Q9NQ69 397 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 C1GALT1Q9NS00 363 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 PAK5Q9P286 719 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 PADI1Q9ULC6 663 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 TCAF1Q9Y4C2 921 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 PCDHGA6Q9Y5G7 932 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 MED13Q9UHV7 2174 aa12.02□□□□□ -0.49
VEGFA-223ENST00000523125 PCM1Q15154 2024 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 UBR5O95071 2799 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-223ENST00000523125 SLC9B1P1A6NJY1 282 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 IFRD1O00458 451 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-223ENST00000523125 LIN7AO14910 233 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-223ENST00000523125 ZIC2O95409 532 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-223ENST00000523125 GAS8O95995 478 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 FGGP02679 453 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 MT-ND3P03897 115 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 CCNYL3P0C7X3 344 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 TCN2P20062 427 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 PRDX3P30048 256 aaKnown RBP12.01□□□□□ -0.49
VEGFA-223ENST00000523125 CCR10P46092 362 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 KCNJ1P48048 391 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 ARL4DP49703 201 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 TUBB4BP68371 445 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 MC1RQ01726 317 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 PRKAA1Q13131 559 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 PRKG2Q13237 762 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 KCNAB2Q13303 367 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 LAMB3Q13751 1172 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 TUBB2AQ13885 445 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 BRD3Q15059 726 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-223ENST00000523125 C16orf46Q6P387 395 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 FAM199XQ6PEV8 388 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-223ENST00000523125 AFTPHQ6ULP2 937 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 AMIGO1Q86WK6 493 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 SLC38A9Q8NBW4 561 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 OR5AR1Q8NGP9 310 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 OR4L1Q8NH43 312 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 CT55Q8WUE5 264 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 RUFY1Q96T51 708 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 HGH1Q9BTY7 390 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 TUBB2BQ9BVA1 445 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 PITPNM3Q9BZ71 974 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 TWSG1Q9GZX9 223 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 SLC25A18Q9H1K4 315 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 XKR8Q9H6D3 395 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 KCND1Q9NSA2 647 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 TUBD1Q9UJT1 453 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 ICKQ9UPZ9 632 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 ZKSCAN5Q9Y2L8 839 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 ASH1LQ9NR48 2969 aaKnown RBP12.01□□□□□ -0.49
VEGFA-223ENST00000523125 TNRC6AQ8NDV7 1962 aaKnown RBP12.01□□□□□ -0.49
VEGFA-223ENST00000523125 MYO18BQ8IUG5 2567 aa12.01□□□□□ -0.49
VEGFA-223ENST00000523125 SPTA1P02549 2419 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 SETXQ7Z333 2677 aaKnown RBP12□□□□□ -0.49
VEGFA-223ENST00000523125 GSAPA4D1B5 854 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 PYCARD-AS1I3L0S3 204 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 MATN2O00339 956 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 QSOX1O00391 747 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 SUV39H1O43463 412 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 SLC28A2O43868 658 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 FTH1P02794 183 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms