RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 PLEKHH3Q7Z736 793 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 GALNT16Q8N428 558 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 FADS6Q8N9I5 356 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 C8orf58Q8NAV2 365 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 BHLHE23Q8NDY6 225 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 WDR20Q8TBZ3 569 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ATL1Q8WXF7 558 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 SPDL1Q96EA4 605 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ZC3HAV1LQ96H79 300 aaKnown RBP3.93□□□□□ -1.78
SKP1-209ENST00000522552 CDKN2AIPNLQ96HQ2 116 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 HARBI1Q96MB7 349 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 TEFMQ96QE5 360 aaKnown RBP3.93□□□□□ -1.78
SKP1-209ENST00000522552 SNX18Q96RF0 628 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 CRAMP1Q96RY5 1269 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ZNF607Q96SK3 696 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 PCYT2Q99447 389 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 FAM110AQ9BQ89 295 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 MXRA8Q9BRK3 442 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ABHD14AQ9BUJ0 271 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 RNF26Q9BY78 433 aaPredicted RBP3.93□□□□□ -1.78
SKP1-209ENST00000522552 TMEM245Q9H330 911 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 XKR8Q9H6D3 395 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 METTL7AQ9H8H3 244 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 MAGEF1Q9HAY2 307 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 TXNRD2Q9NNW7 524 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ZCCHC3Q9NUD5 404 aaKnown RBP3.93□□□□□ -1.78
SKP1-209ENST00000522552 TBC1D13Q9NVG8 400 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 NDUFA13Q9P0J0 144 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 TBC1D7Q9P0N9 293 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ENTPD4Q9Y227 616 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 FOXA2Q9Y261 457 aaPredicted RBP3.93□□□□□ -1.78
SKP1-209ENST00000522552 NR2E1Q9Y466 385 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 PMS2P1A4D2B8 440 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 TMEM247A6NEH6 219 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 DUXAA6NLW8 204 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 LGALS8O00214 317 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 CYR61O00622 381 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 PRRG1O14668 218 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 MEIS2O14770 477 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 MAPK13O15264 365 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 SUV39H1O43463 412 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 MFN2O95140 757 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 SERPINA3P01011 423 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 PLA2G1BP04054 148 aaKnown RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 YES1P07947 543 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 IL6RP08887 468 aaPredicted RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 ANKRD34CP0C6C1 535 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 UQCRFS1P1P0C7P4 283 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 PCNAP12004 261 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 PTBP1P26599 531 aaKnown RBP eCLIP3.92□□□□□ -1.78
SKP1-209ENST00000522552 NMBRP28336 390 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 PRDX6P30041 224 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 RGS7P49802 495 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 AIF1P55008 147 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 EIF3EP60228 445 aaKnown RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 WDR5P61964 334 aaKnown RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 SREBF2Q12772 1141 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 NAE1Q13564 534 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 PDK4Q16654 411 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 FAM174BQ3ZCQ3 159 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 SGO1Q5FBB7 561 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 TREML2Q5T2D2 321 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 CCNYL2Q5T2Q4 361 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 TMEM268Q5VZI3 342 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 SLC23A3Q6PIS1 610 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 B3GLCTQ6Y288 498 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 DPPA4Q7L190 304 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 CIR1Q86X95 450 aaPredicted RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 NRROSQ86YC3 692 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 KLBQ86Z14 1044 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 LRRC56Q8IYG6 542 aaPredicted RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 ZBTB2Q8N680 514 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 TMEM217Q8N7C4 229 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 MINDY2Q8NBR6 621 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 OR8K3Q8NH51 312 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 EXD1Q8NHP7 514 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 OIT3Q8WWZ8 545 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 SYN2Q92777 582 aaPredicted RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 INPP5DQ92835 1189 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 NT5C3BQ969T7 300 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 SLCO4A1Q96BD0 722 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 C11orf24Q96F05 449 aaPredicted RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 LINGO1Q96FE5 620 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 RPGRIP1Q96KN7 1286 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 ZNF583Q96ND8 569 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 SLITRK1Q96PX8 696 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 PLEKHG4BQ96PX9 1271 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 FRG2BQ96QU4 278 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 SPATA25Q9BR10 227 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 ATG101Q9BSB4 218 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 TSPYL1Q9H0U9 437 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 ACTR8Q9H981 624 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 TBC1D17Q9HA65 648 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 ROPN1Q9HAT0 212 aaPredicted RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 MKKSQ9NPJ1 570 aaPredicted RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 HYPKQ9NX55 129 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 TFCP2L1Q9NZI6 479 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 ARPP21Q9UBL0 812 aaPredicted RBP3.92□□□□□ -1.78
SKP1-209ENST00000522552 MGAT4BQ9UQ53 548 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 MRPS2Q9Y399 296 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms