RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 NPY2RP49146 381 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 KPNA2P52292 529 aaKnown RBP23.82■■□□□ 1.4
SNF8-213ENST00000514929 CRADDP78560 199 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 HSD11B2P80365 405 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 ACY1Q03154 408 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.82■■□□□ 1.4
SNF8-213ENST00000514929 AARS2Q5JTZ9 985 aaKnown RBP23.82■■□□□ 1.4
SNF8-213ENST00000514929 C6orf15Q6UXA7 325 aaPredicted RBP23.82■■□□□ 1.4
SNF8-213ENST00000514929 CARFQ8N187 725 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 ZNF843Q8N446 348 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 OR52E1Q8NGJ3 308 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 STAMBPL1Q96FJ0 436 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 MED8Q96G25 268 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 SGSM3Q96HU1 749 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 SLC45A3Q96JT2 553 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 PBKQ96KB5 322 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 SEMA4CQ9C0C4 833 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 CATSPERZQ9NTU4 200 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 TTC7AQ9ULT0 858 aaPredicted RBP23.82■■□□□ 1.4
SNF8-213ENST00000514929 PIKFYVEQ9Y2I7 2098 aa23.82■■□□□ 1.4
SNF8-213ENST00000514929 GSAPA4D1B5 854 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 ZNF891A8MT65 544 aaPredicted RBP23.81■■□□□ 1.4
SNF8-213ENST00000514929 ZBTB11O95625 1053 aaPredicted RBP23.81■■□□□ 1.4
SNF8-213ENST00000514929 CDH3P22223 829 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 STAT5AP42229 794 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 VPS41P49754 854 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 TERF1P54274 439 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 CDK16Q00536 496 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 PLOD1Q02809 727 aaPredicted RBP23.81■■□□□ 1.4
SNF8-213ENST00000514929 PRKG2Q13237 762 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 SEMA3AQ14563 771 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 TRIP13Q15645 432 aaPredicted RBP23.81■■□□□ 1.4
SNF8-213ENST00000514929 KCTD19Q17RG1 926 aaPredicted RBP23.81■■□□□ 1.4
SNF8-213ENST00000514929 LINC00303Q3SY05 128 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 NAPRTQ6XQN6 538 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 GALNT6Q8NCL4 622 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 MS4A14Q96JA4 679 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 TFB2MQ9H5Q4 396 aaKnown RBP23.81■■□□□ 1.4
SNF8-213ENST00000514929 FGF21Q9NSA1 209 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 SOHLH2Q9NX45 425 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 POMT2Q9UKY4 750 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 RPS6KL1Q9Y6S9 549 aa23.81■■□□□ 1.4
SNF8-213ENST00000514929 TPSB2P20231 275 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 TPSAB1Q15661 275 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 TBR1Q16650 682 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 TMTC4Q5T4D3 741 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 FBXO38Q6PIJ6 1188 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 BPHLQ86WA6 291 aaPredicted RBP23.8■■□□□ 1.4
SNF8-213ENST00000514929 AMIGO1Q86WK6 493 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 RASGEF1CQ8N431 466 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 D2HGDHQ8N465 521 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 MAGOHBQ96A72 148 aaKnown RBP23.8■■□□□ 1.4
SNF8-213ENST00000514929 PPM1MQ96MI6 270 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 TSSK1BQ9BXA7 367 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 ASF1AQ9Y294 204 aa23.8■■□□□ 1.4
SNF8-213ENST00000514929 SLC5A10A0PJK1 596 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 ZSCAN12O43309 604 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 ITGB6P18564 788 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 MGAT1P26572 445 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 GPS1Q13098 491 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 LRRC8BQ6P9F7 803 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 LDB1Q86U70 411 aaPredicted RBP23.79■■□□□ 1.4
SNF8-213ENST00000514929 REXO1L1PQ8IX06 675 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 OR5AR1Q8NGP9 310 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 FCRL4Q96PJ5 515 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 NAP1L3Q99457 506 aaPredicted RBP23.79■■□□□ 1.4
SNF8-213ENST00000514929 AP1M1Q9BXS5 423 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 XKR8Q9H6D3 395 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 C1GALT1Q9NS00 363 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 TREX1Q9NSU2 369 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 MARCH4Q9P2E8 410 aaPredicted RBP23.79■■□□□ 1.4
SNF8-213ENST00000514929 IL17BQ9UHF5 180 aa23.79■■□□□ 1.4
SNF8-213ENST00000514929 BTN3A3O00478 584 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 BTN3A1O00481 513 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 CD3EAPO15446 510 aaKnown RBP23.78■■□□□ 1.4
SNF8-213ENST00000514929 TIAF1O95411 115 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 KRT14P02533 472 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 MT-ND3P03897 115 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 CCNYL3P0C7X3 344 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 ACADLP28330 430 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 NMBRP28336 390 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 TTPAP49638 278 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 CSE1LP55060 971 aaKnown RBP23.78■■□□□ 1.4
SNF8-213ENST00000514929 SARNPP82979 210 aaKnown RBP23.78■■□□□ 1.4
SNF8-213ENST00000514929 PWWP2BQ6NUJ5 590 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 TTC27Q6P3X3 843 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 SLC35F6Q8N357 371 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 EXD3Q8N9H8 876 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 NRTNQ99748 197 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 SYBUQ9NX95 663 aa23.78■■□□□ 1.4
SNF8-213ENST00000514929 TCRBV7S3A2A0A539 114 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 SLC9B1P1A6NJY1 282 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 C2orf74A8MZ97 194 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 BHMG1C9JSJ3 638 aaPredicted RBP23.77■■□□□ 1.4
SNF8-213ENST00000514929 NKX2-8O15522 239 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 FAM87AP0C7U9 286 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 PRKAR1AP10644 381 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 PRDX3P30048 256 aaKnown RBP23.77■■□□□ 1.4
SNF8-213ENST00000514929 DLSTP36957 453 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 TUBB4BP68371 445 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms