RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 BRSK2Q8IWQ3 736 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 SPATA18Q8TC71 538 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 SORCS1Q8WY21 1168 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 EID2BQ96D98 161 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 SCMH1Q96GD3 660 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 NUSAP1Q9BXS6 441 aaKnown RBP6.45□□□□□ -1.38
USP53-206ENST00000510737 UBN1Q9NPG3 1134 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 PRDM8Q9NQV8 689 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 NRBP2Q9NSY0 501 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 AGPAT5Q9NUQ2 364 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 ADAM18Q9Y3Q7 739 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 HES2Q9Y543 173 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 COL5A1P20908 1838 aaPredicted RBP6.45□□□□□ -1.38
USP53-206ENST00000510737 IGKV6-21A0A0C4DH24 114 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 ARHGEF37A1IGU5 675 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 GOLGA6L3A6NEY3 463 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 J3KR12 359 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 ZNF197O14709 1029 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 SYN3O14994 580 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 ACP5P13686 325 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 CHN1P15882 459 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 EIF2S3P41091 472 aaKnown RBP6.44□□□□□ -1.38
USP53-206ENST00000510737 NEK3P51956 506 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 CYP4A11Q02928 519 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 HNRNPDQ14103 355 aaKnown RBP6.44□□□□□ -1.38
USP53-206ENST00000510737 DHX34Q14147 1143 aaKnown RBP6.44□□□□□ -1.38
USP53-206ENST00000510737 STARD3Q14849 445 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 XKR9Q5GH70 373 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 ATPAF1Q5TC12 328 aaPredicted RBP6.44□□□□□ -1.38
USP53-206ENST00000510737 TYW3Q6IPR3 259 aaKnown RBP6.44□□□□□ -1.38
USP53-206ENST00000510737 SLC44A2Q8IWA5 706 aaPredicted RBP6.44□□□□□ -1.38
USP53-206ENST00000510737 NAGSQ8N159 534 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 HDDC3Q8N4P3 179 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 BICD1Q96G01 975 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 TEFMQ96QE5 360 aaKnown RBP6.44□□□□□ -1.38
USP53-206ENST00000510737 UBAC1Q9BSL1 405 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 GTPBP2Q9BX10 602 aaKnown RBP6.44□□□□□ -1.38
USP53-206ENST00000510737 FZD8Q9H461 694 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 CXorf56Q9H5V9 222 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 MINDY3Q9H8M7 445 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 TTC41PQ6P2S7 1318 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 EML5Q05BV3 1969 aa6.44□□□□□ -1.38
USP53-206ENST00000510737 TMEM150BA6NC51 233 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 FAM90A20PA6NIJ5 464 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 FAM86B1E9PN63 330 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 ACTL6BO94805 426 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 STBD1O95210 358 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 SEC24AO95486 1093 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 APBB3O95704 486 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 EGFP01133 1207 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 FAM86B2P0C5J1 330 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 CYP4B1P13584 511 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 PTGER3P43115 390 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 GLIPR1P48060 266 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 CSRP3P50461 194 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 HDAC1Q13547 482 aaPredicted RBP6.43□□□□□ -1.38
USP53-206ENST00000510737 TEAD2Q15562 447 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 CYP4A22Q5TCH4 519 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 AADACL2Q6P093 401 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 C9orf139Q6ZV77 190 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 SYT13Q7L8C5 426 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 PATL1Q86TB9 770 aaKnown RBP6.43□□□□□ -1.38
USP53-206ENST00000510737 SRLQ86TD4 932 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 ZNF410Q86VK4 478 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 FRMD1Q8N878 549 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 CNNM3Q8NE01 707 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 RFWD2Q8NHY2 731 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 RRP36Q96EU6 259 aaKnown RBP6.43□□□□□ -1.38
USP53-206ENST00000510737 PABPC3Q9H361 631 aaKnown RBP6.43□□□□□ -1.38
USP53-206ENST00000510737 DCTPP1Q9H773 170 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 MVB12BQ9H7P6 319 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 METTL14Q9HCE5 456 aaKnown RBP6.43□□□□□ -1.38
USP53-206ENST00000510737 SUCLA2Q9P2R7 463 aaPredicted RBP6.43□□□□□ -1.38
USP53-206ENST00000510737 PILRBQ9UKJ0 227 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 C19orf53Q9UNZ5 99 aaPredicted RBP6.43□□□□□ -1.38
USP53-206ENST00000510737 SPAG17Q6Q759 2223 aa6.43□□□□□ -1.38
USP53-206ENST00000510737 SF3B1O75533 1304 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP53-206ENST00000510737 KIF26AQ9ULI4 1882 aaPredicted RBP6.43□□□□□ -1.38
USP53-206ENST00000510737 UBR5O95071 2799 aaPredicted RBP6.42□□□□□ -1.38
USP53-206ENST00000510737 ACACAQ13085 2346 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 IGLV3-22A0A075B6J6 115 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 hCG_1642624A0A1W2PR95 340 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 MAGEA13PA6NCF6 341 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 IPO5O00410 1097 aaKnown RBP6.42□□□□□ -1.38
USP53-206ENST00000510737 TRDMT1O14717 391 aaKnown RBP6.42□□□□□ -1.38
USP53-206ENST00000510737 GNALP38405 381 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 ATXN3P54252 364 aaPredicted RBP6.42□□□□□ -1.38
USP53-206ENST00000510737 GALNT1Q10472 559 aaPredicted RBP6.42□□□□□ -1.38
USP53-206ENST00000510737 DMC1Q14565 340 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 MAPK6Q16659 721 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 UGCGQ16739 394 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 DGAT2L7PQ6IED9 249 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 SYNE3Q6ZMZ3 975 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 RAB11FIP2Q7L804 512 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 ARID3BQ8IVW6 561 aaPredicted RBP6.42□□□□□ -1.38
USP53-206ENST00000510737 DCUN1D3Q8IWE4 304 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 SRBD1Q8N5C6 995 aaKnown RBP6.42□□□□□ -1.38
USP53-206ENST00000510737 MINDY1Q8N5J2 469 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 OR4N2Q8NGD1 307 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 ZNF461Q8TAF7 563 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms