RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MT-CO1P00395 513 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 CD247P20963 164 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 GSTM2P28161 218 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 CCNFP41002 786 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 PPP3CAQ08209 521 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 GTF2H2Q13888 395 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 ELOAQ14241 798 aaKnown RBP8.25□□□□□ -1.09
HTT-208ENST00000510626 GTF2H2CQ6P1K8 395 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 ZNF615Q8N8J6 731 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 SLC7A6OSQ96CW6 309 aaPredicted RBP8.25□□□□□ -1.09
HTT-208ENST00000510626 GAD1Q99259 594 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 BTBD1Q9H0C5 482 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 OR51E2Q9H255 320 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 ASB3Q9Y575 518 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 GTPBP1O00178 669 aaKnown RBP8.25□□□□□ -1.09
HTT-208ENST00000510626 PPP2R2BQ00005 443 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 GPAT3Q53EU6 434 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 SLC22A16Q86VW1 577 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 SLC22A15Q8IZD6 547 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 TNFRSF10DQ9UBN6 386 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 DCLK1O15075 740 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 ABL2P42684 1182 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 GRIK4Q16099 956 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 TMEM53Q6P2H8 277 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 GK5Q6ZS86 529 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 CMTR2Q8IYT2 770 aaKnown RBP8.25□□□□□ -1.09
HTT-208ENST00000510626 LRTOMTQ8WZ04 291 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 NXPE2Q96DL1 559 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 C7orf50Q9BRJ6 194 aaKnown RBP8.25□□□□□ -1.09
HTT-208ENST00000510626 SPG21Q9NZD8 308 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 CMAHPQ9Y471 501 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 TCAF1Q9Y4C2 921 aa8.25□□□□□ -1.09
HTT-208ENST00000510626 PLD2O14939 933 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 WNT3AP56704 352 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 MEDAGQ5VYS4 303 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 FAM171BQ6P995 826 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 DEFB106AQ8N104 65 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 LRRC58Q96CX6 371 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 CYP2S1Q96SQ9 504 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 POLR3HQ9Y535 204 aaPredicted RBP8.24□□□□□ -1.09
HTT-208ENST00000510626 CNTNAP2Q9UHC6 1331 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 PTGER3P43115 390 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 ARF5P84085 180 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 SREBF2Q12772 1141 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 LSAMPQ13449 338 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 SH3D19Q5HYK7 790 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 ZDHHC21Q8IVQ6 265 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 LGI2Q8N0V4 545 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 ZBED6CLQ96FA7 236 aaPredicted RBP8.24□□□□□ -1.09
HTT-208ENST00000510626 TBX1O43435 398 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 ATG13O75143 517 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 NME6O75414 186 aaPredicted RBP8.24□□□□□ -1.09
HTT-208ENST00000510626 GIMD1P0DJR0 217 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 CLCQ05315 142 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 XKR4Q5GH76 650 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 SPATA6LQ8N4H0 392 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 SIPA1Q96FS4 1042 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 CELF6Q96J87 481 aaKnown RBP8.24□□□□□ -1.09
HTT-208ENST00000510626 PPM1MQ96MI6 270 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 KLHL5Q96PQ7 755 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 COPS8Q99627 209 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 SNRNP25Q9BV90 132 aaKnown RBP8.24□□□□□ -1.09
HTT-208ENST00000510626 HEBP2Q9Y5Z4 205 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 PCP4L1A6NKN8 68 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 NUDT19A8MXV4 375 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 ECHS1P30084 290 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 EIF4HQ15056 248 aaKnown RBP8.24□□□□□ -1.09
HTT-208ENST00000510626 RALGPS1Q5JS13 557 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 FAM35AQ86V20 835 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 PCDHB16Q9NRJ7 776 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 KRBOX1C9JBD0 128 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 PSMD10O75832 226 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 OR7A10O76100 309 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 RCBTB2O95199 551 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 DEFA5Q01523 94 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 OCLNQ16625 522 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 CES3Q6UWW8 571 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 METTL25Q8N6Q8 603 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 OR8J3Q8NGG0 315 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 CPB2Q96IY4 423 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 CSPG4P5Q96PW8 444 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 TMEM209Q96SK2 561 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 CNPPD1Q9BV87 410 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 OXSMQ9NWU1 459 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 ZSWIM3Q96MP5 696 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 MAGIXQ9H6Y5 334 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 DNASE1L1P49184 302 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 RHDQ02161 417 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 PHOX2BQ99453 314 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 NT5DC2Q9H857 520 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 USP17L7P0C7H9 530 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 SAGP10523 405 aaPredicted RBP8.24□□□□□ -1.09
HTT-208ENST00000510626 RYKP34925 604 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 SPIN4Q56A73 249 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 GPR158Q5T848 1215 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 CNOT6Q9ULM6 557 aaKnown RBP8.24□□□□□ -1.09
HTT-208ENST00000510626 SLC27A6Q9Y2P4 619 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 NRCAMQ92823 1304 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 I3L521 148 aa8.24□□□□□ -1.09
HTT-208ENST00000510626 TMEM127O75204 238 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms