RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 CCDC89Q8N998 374 aa21.46■■□□□ 1.03
PACRGL-220ENST00000508952 OR52E1Q8NGJ3 308 aa21.46■■□□□ 1.03
PACRGL-220ENST00000508952 CT55Q8WUE5 264 aa21.46■■□□□ 1.03
PACRGL-220ENST00000508952 HDAC10Q969S8 669 aa21.46■■□□□ 1.03
PACRGL-220ENST00000508952 ZNF778Q96MU6 729 aa21.46■■□□□ 1.03
PACRGL-220ENST00000508952 HGH1Q9BTY7 390 aa21.46■■□□□ 1.03
PACRGL-220ENST00000508952 ADNPQ9H2P0 1102 aa21.46■■□□□ 1.03
PACRGL-220ENST00000508952 PADI1Q9ULC6 663 aa21.46■■□□□ 1.03
PACRGL-220ENST00000508952 HEATR9A2RTY3 570 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 SLC9B1P1A6NJY1 282 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 BTN3A3O00478 584 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 BTN3A1O00481 513 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 ZSCAN5DPP0CG00 497 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 CDH3P22223 829 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 TUBB4BP68371 445 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 RPA4Q13156 261 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 PRKG2Q13237 762 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 TUBB2AQ13885 445 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 ITIH4Q14624 930 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 BRD3Q15059 726 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 SIX1Q15475 284 aaPredicted RBP21.45■■□□□ 1.02
PACRGL-220ENST00000508952 TSTD2Q5T7W7 516 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 ZNF449Q6P9G9 518 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 NAPRTQ6XQN6 538 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 ELMO1Q92556 727 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 TFGQ92734 400 aaPredicted RBP21.45■■□□□ 1.02
PACRGL-220ENST00000508952 TUBB2BQ9BVA1 445 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 TLR10Q9BXR5 811 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 XKR8Q9H6D3 395 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 MVB12BQ9H7P6 319 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 AKIRIN1Q9H9L7 192 aaPredicted RBP21.45■■□□□ 1.02
PACRGL-220ENST00000508952 LHX9Q9NQ69 397 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 CASS4Q9NQ75 786 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 BTRCQ9Y297 605 aa21.45■■□□□ 1.02
PACRGL-220ENST00000508952 OR1I1O60431 355 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 GOT2P00505 430 aaKnown RBP21.44■■□□□ 1.02
PACRGL-220ENST00000508952 MT-ND3P03897 115 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 APRTP07741 180 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 GSTM1P09488 218 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 GSTM4Q03013 218 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 DNASE1L3Q13609 305 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 BOP1Q14137 746 aaKnown RBP21.44■■□□□ 1.02
PACRGL-220ENST00000508952 ERV3-1Q14264 604 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 PACS1Q6VY07 963 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 BPHLQ86WA6 291 aaPredicted RBP21.44■■□□□ 1.02
PACRGL-220ENST00000508952 CARFQ8N187 725 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 UBE2Q2Q8WVN8 375 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 ZNF501Q96CX3 271 aaPredicted RBP21.44■■□□□ 1.02
PACRGL-220ENST00000508952 FCRL4Q96PJ5 515 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 RANBP9Q96S59 729 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 TRIM4Q9C037 500 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 TFB2MQ9H5Q4 396 aaKnown RBP21.44■■□□□ 1.02
PACRGL-220ENST00000508952 PAK5Q9P286 719 aa21.44■■□□□ 1.02
PACRGL-220ENST00000508952 SPTBP11277 2137 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 LIN7AO14910 233 aaPredicted RBP21.43■■□□□ 1.02
PACRGL-220ENST00000508952 FTH1P02794 183 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 FURINP09958 794 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 CCDC175P0C221 793 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 ADRA1DP25100 572 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 PRDX3P30048 256 aaKnown RBP21.43■■□□□ 1.02
PACRGL-220ENST00000508952 RPL22P35268 128 aaKnown RBP21.43■■□□□ 1.02
PACRGL-220ENST00000508952 CRTC2Q53ET0 693 aaPredicted RBP21.43■■□□□ 1.02
PACRGL-220ENST00000508952 TMTC4Q5T4D3 741 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 FAM199XQ6PEV8 388 aaPredicted RBP21.43■■□□□ 1.02
PACRGL-220ENST00000508952 AFTPHQ6ULP2 937 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 TMEM126BQ8IUX1 230 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 OR5AR1Q8NGP9 310 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 OR6P1Q8NGX9 317 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.43■■□□□ 1.02
PACRGL-220ENST00000508952 RUFY1Q96T51 708 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 KLHL25Q9H0H3 589 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 C1GALT1Q9NS00 363 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 KCND1Q9NSA2 647 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 TCAF1Q9Y4C2 921 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 PCDHB3Q9Y5E6 796 aa21.43■■□□□ 1.02
PACRGL-220ENST00000508952 MATN2O00339 956 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 SCRG1O75711 98 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 ST6GAL1P15907 406 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 LAMB3Q13751 1172 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 CCNG2Q16589 344 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 KCTD19Q17RG1 926 aaPredicted RBP21.42■■□□□ 1.02
PACRGL-220ENST00000508952 ZNF534Q76KX8 674 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 SETXQ7Z333 2677 aaKnown RBP21.42■■□□□ 1.02
PACRGL-220ENST00000508952 TMEM135Q86UB9 458 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 AMIGO1Q86WK6 493 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 PTRH1Q86Y79 214 aaKnown RBP21.42■■□□□ 1.02
PACRGL-220ENST00000508952 OR4L1Q8NH43 312 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 APOBEC4Q8WW27 367 aaKnown RBP21.42■■□□□ 1.02
PACRGL-220ENST00000508952 TUBD1Q9UJT1 453 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 KCND3Q9UK17 655 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 RIMKLBQ9ULI2 386 aa21.42■■□□□ 1.02
PACRGL-220ENST00000508952 MYO18BQ8IUG5 2567 aa21.41■■□□□ 1.02
PACRGL-220ENST00000508952 QSOX1O00391 747 aa21.41■■□□□ 1.02
PACRGL-220ENST00000508952 SUV39H1O43463 412 aa21.41■■□□□ 1.02
PACRGL-220ENST00000508952 CPNE3O75131 537 aaKnown RBP21.41■■□□□ 1.02
PACRGL-220ENST00000508952 FGGP02679 453 aa21.41■■□□□ 1.02
PACRGL-220ENST00000508952 OR56A5P0C7T3 313 aa21.41■■□□□ 1.02
PACRGL-220ENST00000508952 PVRP15151 417 aa21.41■■□□□ 1.02
PACRGL-220ENST00000508952 CSE1LP55060 971 aaKnown RBP21.41■■□□□ 1.02
PACRGL-220ENST00000508952 ACVR1Q04771 509 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms