RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 INHBCP55103 352 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 OR1D5P58170 312 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CCL7P80098 99 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 PRKAA1Q13131 559 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 GPR18Q14330 331 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 FASTKD3Q14CZ7 662 aaKnown RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 BRD3Q15059 726 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 AMZ1Q400G9 498 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 ZNF658BQ4V348 819 aaPredicted RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 CTSL3PQ5NE16 218 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 FAM45BPQ6NSW5 357 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CYB5D1Q6P9G0 228 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CCNI2Q6ZMN8 369 aaPredicted RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 MICALCLQ6ZW33 695 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 NEK10Q6ZWH5 1172 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 OOSP2Q86WS3 158 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 DCUN1D3Q8IWE4 304 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 ZBTB2Q8N680 514 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 FAM45AQ8TCE6 357 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 NXPE2Q96DL1 559 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CCDC97Q96F63 343 aaPredicted RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 ZDHHC12Q96GR4 267 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 VPS39Q96JC1 886 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 RMDN2Q96LZ7 410 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 FERD3LQ96RJ6 166 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 INSM2Q96T92 566 aaPredicted RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 CMKLR1Q99788 373 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CPNE1Q99829 537 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 AARSD1Q9BTE6 412 aaKnown RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 SCNM1Q9BWG6 230 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 RAB33BQ9H082 229 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 LATS2Q9NRM7 1088 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 DMGDHQ9UI17 866 aaKnown RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 TRMT6Q9UJA5 497 aaKnown RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 MSRB2Q9Y3D2 182 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 A0A1W2PQM1 296 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 TCRBV9S1A1TA0A576 114 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 IQCF5A8MTL0 148 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 BHMG1C9JSJ3 638 aaPredicted RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 HGSO14964 777 aaPredicted RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 TOX3O15405 576 aaPredicted RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 MAP3K7O43318 606 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 NIPSNAP2O75323 286 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 HAUS5O94927 633 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 PROS1P07225 676 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 RHOXF2BP0C7M4 288 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 ITGB6P18564 788 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 ACADLP28330 430 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 CD1CP29017 333 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 SHMT2P34897 504 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 DEKP35659 375 aaKnown RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 MLLT3P42568 568 aaPredicted RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 SLC12A2P55011 1212 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 CSE1LP55060 971 aaKnown RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 MPP1Q00013 466 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 TARDBPQ13148 414 aaKnown RBP eCLIP8.91□□□□□ -0.98
NUP54-207ENST00000508583 PDAP1Q13442 181 aaKnown RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 ISXQ2M1V0 245 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 TEX35Q5T0J7 233 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 TMEM71Q6P5X7 295 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 TRMT10BQ6PF06 316 aaKnown RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 CAPN12Q6ZSI9 719 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 TAOK1Q7L7X3 1001 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 STRA8Q7Z7C7 330 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 SFTPA2Q8IWL1 248 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 CTAGE3PQ8IX95 158 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 LSMEM2Q8N112 164 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 CARFQ8N187 725 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 KRT222Q8N1A0 295 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 GPATCH11Q8N954 259 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 OR5K2Q8NHB8 316 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 NAT14Q8WUY8 206 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 LCN9Q8WX39 176 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 NCSTNQ92542 709 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 INPP5DQ92835 1189 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 MARVELD3Q96A59 401 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 TSPAN17Q96FV3 270 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 LIN37Q96GY3 246 aaPredicted RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 C9orf72Q96LT7 481 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 CD180Q99467 661 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 RHOXF2Q9BQY4 288 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 WDR83Q9BRX9 315 aaKnown RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 NRSN2Q9GZP1 204 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 SRMSQ9H3Y6 488 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 RHOJQ9H4E5 214 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 TFB2MQ9H5Q4 396 aaKnown RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 EPHA6Q9UF33 1036 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 DHRS7Q9Y394 339 aa8.91□□□□□ -0.98
NUP54-207ENST00000508583 CFAP20Q9Y6A4 193 aaKnown RBP8.91□□□□□ -0.98
NUP54-207ENST00000508583 PTPRBP23467 1997 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 MN1Q10571 1320 aaPredicted RBP8.9□□□□□ -0.98
NUP54-207ENST00000508583 CCDC187A0A096LP49 1063 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 ZNF839A8K0R7 811 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 B4GAT1O43505 415 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 SLU7O95391 586 aaKnown RBP8.9□□□□□ -0.98
NUP54-207ENST00000508583 TOP3BO95985 862 aaKnown RBP8.9□□□□□ -0.98
NUP54-207ENST00000508583 AHSGP02765 367 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 CATP04040 527 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms