RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 LRRTM4Q86VH4 590 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 LCA5Q86VQ0 697 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 CFAP206Q8IYR0 622 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 SPATA6LQ8N4H0 392 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 OR56A4Q8NGH8 313 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 PCED1AQ9H1Q7 454 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 COG4Q9H9E3 785 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 HS3ST3A1Q9Y663 406 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 CABIN1Q9Y6J0 2220 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 HNRNPCL1O60812 293 aaKnown RBP10.79□□□□□ -0.68
PROM1-207ENST00000508167 POP7O75817 140 aaKnown RBP10.79□□□□□ -0.68
PROM1-207ENST00000508167 IGLV3-19P01714 112 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 MPSTP25325 297 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 CA5AP35218 305 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 BLKP51451 505 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 AFF3P51826 1226 aaKnown RBP10.79□□□□□ -0.68
PROM1-207ENST00000508167 ILF3Q12906 894 aaKnown RBP eCLIP10.79□□□□□ -0.68
PROM1-207ENST00000508167 NAA25Q14CX7 972 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 SETDB1Q15047 1291 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 CCDC6Q16204 474 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 FAM45BPQ6NSW5 357 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 RDH11Q8TC12 318 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 FAM45AQ8TCE6 357 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 FUBP1Q96AE4 644 aaKnown RBP10.79□□□□□ -0.68
PROM1-207ENST00000508167 ZNF514Q96K75 400 aaPredicted RBP10.79□□□□□ -0.68
PROM1-207ENST00000508167 GPR21Q99679 349 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 RNPEPL1Q9HAU8 725 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 TM9SF3Q9HD45 589 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 KCNK6Q9Y257 313 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 STK38LQ9Y2H1 464 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 ST14Q9Y5Y6 855 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 LATO43561 262 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 GPR37L1O60883 481 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 KLHL2O95198 593 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 COL6A2P12110 1019 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 HOXA6P31267 233 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 C1orf61Q13536 156 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 NFATC4Q14934 902 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 TYSND1Q2T9J0 566 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 WASHC2DQ5SRD0 308 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 ADAMTSL4Q6UY14 1074 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 TAF8Q7Z7C8 310 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 AMZ2Q86W34 360 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.79□□□□□ -0.68
PROM1-207ENST00000508167 A0A1B0GVT2 93 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 TMEM202A6NGA9 273 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 GALR2O43603 387 aaPredicted RBP10.79□□□□□ -0.68
PROM1-207ENST00000508167 VEGFDO43915 354 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 TNFP01375 233 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 ZNF8P17098 575 aaPredicted RBP10.79□□□□□ -0.68
PROM1-207ENST00000508167 ACTR1BP42025 376 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 ACTR1AP61163 376 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 PLK5Q496M5 336 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 SLC30A9Q6PML9 568 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 CLPTM1LQ96KA5 538 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 PSMD13Q9UNM6 376 aa10.79□□□□□ -0.68
PROM1-207ENST00000508167 GOLGA4Q13439 2230 aaKnown RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 DNAH14Q0VDD8 3507 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 TRBV23OR9-2A0A075B6M9 112 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 A0A1B0GTW7 788 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 JUNDP17535 347 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 CTSCP53634 463 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 YPEL5P62699 121 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 CSHL1Q14406 222 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 KLC3Q6P597 504 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 CRLF3Q8IUI8 442 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 CPSF7Q8N684 471 aaKnown RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 DDHD1Q8NEL9 900 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 CNDP1Q96KN2 507 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 BMFQ96LC9 184 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 FOPNLQ96NB1 174 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 LRFN3Q9BTN0 628 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 DUSP15Q9H1R2 295 aaPredicted RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 NCDNQ9UBB6 729 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 ACOT9Q9Y305 439 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 PCDHGA2Q9Y5H1 932 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 OAS3Q9Y6K5 1087 aaKnown RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 TLR4O00206 839 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 CCDC22O60826 627 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 FDXRP22570 491 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 CCND1P24385 295 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 ARRB1P49407 418 aaPredicted RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 DNAJB13P59910 316 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 LIPMQ5VYY2 423 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 TTC23LQ6PF05 361 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 RASGEF1AQ8N9B8 481 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 SIDT2Q8NBJ9 832 aaKnown RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 ASB12Q8WXK4 309 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 LPGAT1Q92604 370 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 PTERQ96BW5 349 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 WWP1Q9H0M0 922 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 SYTL2Q9HCH5 934 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 XPR1Q9UBH6 696 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 SUFUQ9UMX1 484 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 IFRD1O00458 451 aaPredicted RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 SDC3O75056 442 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 CPA2P48052 419 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 SRP54P61011 504 aaKnown RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 ARL13AQ5H913 290 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms