RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 TUBD1Q9UJT1 453 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 POMT2Q9UKY4 750 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 GUCA1BQ9UMX6 200 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 HEBP2Q9Y5Z4 205 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 KCNMB2Q9Y691 235 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 SPENQ96T58 3664 aaKnown RBP13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 PIPSLA2A3N6 862 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 BTN3A1O00481 513 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 OR1I1O60431 355 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 CREG1O75629 220 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 AP2A2O94973 939 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 MT-ND3P03897 115 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZSCAN5DPP0CG00 497 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 MSNP26038 577 aaKnown RBP13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 ACADLP28330 430 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 TUBB4BP68371 445 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 RPA4Q13156 261 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 SNX1Q13596 522 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 LAMB3Q13751 1172 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 TUBB2AQ13885 445 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 BOP1Q14137 746 aaKnown RBP13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 SIX1Q15475 284 aaPredicted RBP13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 SKIDA1Q1XH10 827 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 MEI1Q5TIA1 1274 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 ARMC6Q6NXE6 501 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 ADGRF3Q8IZF5 1079 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 TXLNBQ8N3L3 684 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 OR52E1Q8NGJ3 308 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 HDAC10Q969S8 669 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 TUBB2BQ9BVA1 445 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 SRMSQ9H3Y6 488 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 C1GALT1Q9NS00 363 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 KCND3Q9UK17 655 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZNF148Q9UQR1 794 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 BTRCQ9Y297 605 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 PCDHB3Q9Y5E6 796 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 MYO18BQ8IUG5 2567 aa13.98□□□□□ -0.17
CDC42SE2-209ENST00000506419 CDC14CA4D256 554 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 BHMG1C9JSJ3 638 aaPredicted RBP13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 RECKO95980 971 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 IFNB1P01574 187 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 ST6GAL1P15907 406 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 CDH17Q12864 832 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 GPS2Q13227 327 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 ITIH4Q14624 930 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 BRD3Q15059 726 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 KCTD19Q17RG1 926 aaPredicted RBP13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 PLEKHS1Q5SXH7 462 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 TSTD2Q5T7W7 516 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZNF534Q76KX8 674 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 LINC00523Q86TU6 105 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 CARFQ8N187 725 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 DNAAF3Q8N9W5 541 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 TRAPPC9Q96Q05 1148 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 ALS2CR12Q96Q35 445 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 TLR10Q9BXR5 811 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 FRMD8P1Q9BZ68 369 aaPredicted RBP13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 KLHL25Q9H0H3 589 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 CLMPQ9H6B4 373 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 MVB12BQ9H7P6 319 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 CASS4Q9NQ75 786 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 RELNP78509 3460 aa13.97□□□□□ -0.17
CDC42SE2-209ENST00000506419 SLC5A10A0PJK1 596 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 GSAPA4D1B5 854 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 C21orf140B9A014 251 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 IFRD1O00458 451 aaPredicted RBP13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 SCRG1O75711 98 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 GOT2P00505 430 aaKnown RBP13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 PVRP15151 417 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 CDH3P22223 829 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 ADRA1DP25100 572 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 RPL22P35268 128 aaKnown RBP13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 FDFT1P37268 417 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 NSG1P42857 185 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 CSRP3P50461 194 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 RPS18P62269 152 aaKnown RBP13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 ACVR1Q04771 509 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 ABRQ12979 859 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 PRKAA1Q13131 559 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 SEMA5AQ13591 1074 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 SEMA3AQ14563 771 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 RPS6KA1Q15418 735 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZNF789Q5FWF6 425 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 COLEC12Q5KU26 742 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 TMTC4Q5T4D3 741 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZNF517Q6ZMY9 492 aaPredicted RBP13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 UNC5AQ6ZN44 842 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 AMIGO1Q86WK6 493 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 OR5AR1Q8NGP9 310 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 OR1L3Q8NH93 324 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 RANBP9Q96S59 729 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 PITPNM3Q9BZ71 974 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 TWSG1Q9GZX9 223 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 ACTL8Q9H568 366 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 RAB6BQ9NRW1 208 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 RIMKLBQ9ULI2 386 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 ICKQ9UPZ9 632 aa13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 FARSAQ9Y285 508 aaKnown RBP13.96□□□□□ -0.17
CDC42SE2-209ENST00000506419 ERI2A8K979 691 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms