RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 ATRXP46100 2492 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CCDC187A0A096LP49 1063 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 TRABD2BA6NFA1 517 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 FIGNL2A6NMB9 653 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 C1QTNF9BB2RNN3 333 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 B4GAT1O43505 415 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 SGTAO43765 313 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 UBXN7O94888 489 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 ESR1P03372 595 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 C1QTNF9P0C862 333 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 BRAFP15056 766 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CHRM3P20309 590 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 RPS3P23396 243 aaKnown RBP eCLIP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CD1CP29017 333 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 RBMS1P29558 406 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 FMO4P31512 558 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 ELK3P41970 407 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 ARCN1P48444 511 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CLDN6P56747 220 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 UBE2IP63279 158 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 MRPS25P82663 173 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 HSPA14Q0VDF9 509 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 PDIA2Q13087 525 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 EIF3IQ13347 325 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CRYMQ14894 314 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CLCA4Q14CN2 919 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 FOXR1Q6PIV2 292 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 WDR74Q6RFH5 385 aaPredicted RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 FAM83HQ6ZRV2 1179 aaPredicted RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CEP128Q6ZU80 1094 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 OTOAQ7RTW8 1153 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 ZNF761Q86XN6 746 aaPredicted RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CILP2Q8IUL8 1156 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 PALM2Q8IXS6 379 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 OR4D9Q8NGE8 314 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 WDR36Q8NI36 951 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 PYROXD1Q8WU10 500 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 SKA2Q8WVK7 121 aaPredicted RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 GATA6Q92908 595 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CFAP36Q96G28 342 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 FOPNLQ96NB1 174 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CMKLR1Q99788 373 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CCDC86Q9H6F5 360 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 RDH14Q9HBH5 336 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 SCHIP1Q9P0W5 487 aaPredicted RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 MARCH4Q9P2E8 410 aaPredicted RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 ZNF624Q9P2J8 865 aaPredicted RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 ZMIZ1Q9ULJ6 1067 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 WDR37Q9Y2I8 494 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CRYL1Q9Y2S2 319 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 MRFAP1Q9Y605 127 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CFAP20Q9Y6A4 193 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 ZNF106Q9H2Y7 1883 aaKnown RBP10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 CACNA1GO43497 2377 aa10.29□□□□□ -0.76
AC012339.1-201ENST00000505564 ZCWPW2A0A1B0GU75 182 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 A0A1W2PQM1 296 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 PRR19A6NJB7 356 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 EIF3HO15372 352 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 JMJD7P0C870 316 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 ITGB6P18564 788 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 CCKBRP32239 447 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 CSTF2P33240 577 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 PREPP48147 710 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 PLTPP55058 493 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 CSE1LP55060 971 aaKnown RBP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 ADARP55265 1226 aaKnown RBP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 PRKAA1Q13131 559 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 SQSTM1Q13501 440 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 TRA2AQ13595 282 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 GPR18Q14330 331 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 SEMA3AQ14563 771 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 TYSND1Q2T9J0 566 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 TTLL9Q3SXZ7 439 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 GLE1Q53GS7 698 aaKnown RBP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 HSP90AA5PQ58FG0 334 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 HP1BP3Q5SSJ5 553 aaPredicted RBP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 NKAIN2Q5VXU1 208 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 DUPD1Q68J44 220 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 TMEM71Q6P5X7 295 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 PDZD3Q86UT5 571 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 CCDC25Q86WR0 208 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 ANKMY2Q8IV38 441 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 ZBED8Q8IZ13 594 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 ACVR1CQ8NER5 493 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 TFGQ92734 400 aaPredicted RBP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 ZDHHC12Q96GR4 267 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 ATXN7L3BQ96GX2 97 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 LIN37Q96GY3 246 aaPredicted RBP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 FCRL3Q96P31 734 aaPredicted RBP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 FOXP3Q9BZS1 431 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 TRIT1Q9H3H1 467 aaKnown RBP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 MVB12BQ9H7P6 319 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 POLR1BQ9H9Y6 1135 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 IARS2Q9NSE4 1012 aaKnown RBP10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 POLG2Q9UHN1 485 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 FBXO5Q9UKT4 447 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 CHMP2BQ9UQN3 213 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 ASF1AQ9Y294 204 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 PCDHB11Q9Y5F2 797 aa10.28□□□□□ -0.76
AC012339.1-201ENST00000505564 COMMD10Q9Y6G5 202 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms