RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 SIRPGQ9P1W8 387 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 TBC1D29Q9UFV1 150 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 CORO1CQ9ULV4 474 aaPredicted RBP9.83□□□□□ -0.84
NUP54-203ENST00000504173 COMMD10Q9Y6G5 202 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 KNTC1P50748 2209 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 ITPR2Q14571 2701 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 NBPF19A0A087WUL8 3843 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 C17orf113A0A1B0GUU1 675 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 PDZK1P1A8MUH7 402 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 TRIM38O00635 465 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 TERTO14746 1132 aaKnown RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 LIN7AO14910 233 aaPredicted RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 GIMD1P0DJR0 217 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 SLC2A4P14672 509 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 RPL10P27635 214 aaKnown RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 CXADRP78310 365 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 ILF2Q12905 390 aaKnown RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 BRD3Q15059 726 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 SEPT7Q16181 437 aaKnown RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 UAP1Q16222 522 aaPredicted RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 RBM20Q5T481 1227 aaKnown RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 ZCCHC8Q6NZY4 707 aaKnown RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 ZNF549Q6P9A3 640 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 NAPRTQ6XQN6 538 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 DBX2Q6ZNG2 339 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 OTOAQ7RTW8 1153 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 ZC3HC1Q86WB0 502 aaKnown RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 LILRA3Q8N6C8 439 aaPredicted RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 RHBDD1Q8TEB9 315 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 ZDHHC1Q8WTX9 485 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 CAVIN3Q969G5 261 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 TMEM159Q96B96 161 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 MRRFQ96E11 262 aaKnown RBP9.82□□□□□ -0.84
NUP54-203ENST00000504173 VPS39Q96JC1 886 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 CDC6Q99741 560 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 RHOJQ9H4E5 214 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 PRDM8Q9NQV8 689 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 GULP1Q9UBP9 304 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 ACSL5Q9ULC5 683 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 SRPK3Q9UPE1 567 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 BTBD3Q9Y2F9 522 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 IKBKGQ9Y6K9 419 aa9.82□□□□□ -0.84
NUP54-203ENST00000504173 ZFC3H1O60293 1989 aaKnown RBP9.81□□□□□ -0.84
NUP54-203ENST00000504173 EXOC1LA0A1B0GW35 172 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 FAM95CA0A1B0GW59 222 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 SLC5A10A0PJK1 596 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 FAM149AA5PLN7 773 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 PRR19A6NJB7 356 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 POC1B-GALNT4F8VUJ3 575 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 KPNA5O15131 536 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 SIGLEC6O43699 453 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 VPS26AO75436 327 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 ERLIN1O75477 346 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 FAM155BO75949 473 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 EML2O95834 649 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 APOA4P06727 396 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 INHBAP08476 426 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 SLC35G4P0C7Q5 338 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 F3P13726 295 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 SAT1P21673 171 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 AOAHP28039 575 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 CCR7P32248 378 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 SPRP35270 261 aaPredicted RBP9.81□□□□□ -0.84
NUP54-203ENST00000504173 HALP42357 657 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 MSH2P43246 934 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 PREPP48147 710 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 PLOD1Q02809 727 aaPredicted RBP9.81□□□□□ -0.84
NUP54-203ENST00000504173 HSPA14Q0VDF9 509 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 RPA4Q13156 261 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 BIRC2Q13490 618 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 LY6DQ14210 128 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 SLC29A2Q14542 456 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 TTLL9Q3SXZ7 439 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 ZNF658BQ4V348 819 aaPredicted RBP9.81□□□□□ -0.84
NUP54-203ENST00000504173 GRTP1Q5TC63 336 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 HECTD2Q5U5R9 776 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 METRNLQ641Q3 311 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 FAM45BPQ6NSW5 357 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 UGT3A1Q6NUS8 523 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 ZBTB2Q8N680 514 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 ARL10Q8N8L6 244 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 KYQ8NBH2 561 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 FAM45AQ8TCE6 357 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 ASZ1Q8WWH4 475 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 TTC9Q92623 222 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 KCNJ9Q92806 393 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 GLMNQ92990 594 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 ELMO2Q96JJ3 720 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 PAFAH2Q99487 392 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 GPR21Q99679 349 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 RBBP8Q99708 897 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 CCDC77Q9BR77 488 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 WWP1Q9H0M0 922 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 EPB41L4BQ9H329 900 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 EVA1BQ9NVM1 165 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 TAS2R13Q9NYV9 303 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 FTSJ1Q9UET6 329 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 TRMT6Q9UJA5 497 aaKnown RBP9.81□□□□□ -0.84
NUP54-203ENST00000504173 PSMD13Q9UNM6 376 aa9.81□□□□□ -0.84
NUP54-203ENST00000504173 VWA7Q9Y334 891 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms