RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ITFG1Q8TB96 612 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 AUTS2Q8WXX7 1259 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 GTF2H4Q92759 462 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 HHIPL1Q96JK4 782 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 PHF12Q96QT6 1004 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 C2orf49Q9BVC5 232 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-204ENST00000501271 TLR9Q9NR96 1032 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 ATXN10Q9UBB4 475 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 EBF1Q9UH73 591 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 ANGPTL3Q9Y5C1 460 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 MAGED1Q9Y5V3 778 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-204ENST00000501271 MYOFQ9NZM1 2061 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 ANKRD33BA6NCL7 494 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 NPIPB15A6NHN6 443 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 IFRD1O00458 451 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 RGS14O43566 566 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 TULP3O75386 442 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ANXA6P08133 673 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 MSH3P20585 1137 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 NFKBIAP25963 317 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 PPP3CCP48454 512 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 RPS6KA3P51812 740 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ADARB1P78563 741 aaKnown RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 PLCL1Q15111 1095 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 CRY1Q16526 586 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 SGO1Q5FBB7 561 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 SPANXN4Q5MJ08 99 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 RETSATQ6NUM9 610 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 MACC1Q6ZN28 852 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 TPGS1Q6ZTW0 290 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ARHGAP22Q7Z5H3 698 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 CLVS1Q8IUQ0 354 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ERI1Q8IV48 349 aaKnown RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 MSRB3Q8IXL7 192 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 LIX1Q8N485 282 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 KRTCAP2Q8N6L1 136 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ADAMTS16Q8TE57 1224 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 UBTD2Q8WUN7 234 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 TMBIM1Q969X1 311 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 VOPP1Q96AW1 172 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 BDH2Q9BUT1 245 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 NPLQ9BXD5 320 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 IL21Q9HBE4 155 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 TIMMDC1Q9NPL8 285 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 INSL5Q9Y5Q6 135 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 LOC730098B7Z3J9 87 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 K7EPI3 171 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 PRSS23O95084 383 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 OLFM2O95897 454 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 CXCL10P02778 98 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 RAP2AP10114 183 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 GGT5P36269 586 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 SPAM1P38567 509 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 YAP1P46937 504 aaKnown RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ARSFP54793 590 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 LMAN2Q12907 356 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 NOGQ13253 232 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 NKG7Q16617 165 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ZIK1Q3SY52 487 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ZBED5Q49AG3 693 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 DGKKQ5KSL6 1271 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 SULT1C3Q6IMI6 304 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 SUSD1Q6UWL2 747 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ENPP6Q6UWR7 440 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 TMCO2Q7Z6W1 182 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 FAM217AQ8IXS0 508 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 RGL4Q8IZJ4 473 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 NXPE1Q8N323 547 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 CHCHD4Q8N4Q1 142 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 GPR26Q8NDV2 337 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ZNF548Q8NEK5 533 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 OR2T12Q8NG77 320 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 OR10A6Q8NH74 314 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 GAB3Q8WWW8 586 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 FIG4Q92562 907 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ISOC1Q96CN7 298 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 CCDC115Q96NT0 180 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 HTATIP2Q9BUP3 242 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ABCG8Q9H221 673 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 LATS2Q9NRM7 1088 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 SLC25A37Q9NYZ2 338 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 ZNF490Q9ULM2 529 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 CDC14AQ9UNH5 594 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 EIF3LQ9Y262 564 aaKnown RBP9.66□□□□□ -0.86
CLIP1-204ENST00000501271 PCDHGA11Q9Y5H2 935 aa9.66□□□□□ -0.86
CLIP1-204ENST00000501271 MANBAO00462 879 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 SOCS5O75159 536 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ULK1O75385 1050 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 CD70P32970 193 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 HPCAP84074 193 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 CYP4F8P98187 520 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 CYP4F3Q08477 520 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 MAPKAPK3Q16644 382 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 GTDC1Q4AE62 458 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 FAM98BQ52LJ0 330 aaKnown RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 SPOUT1Q5T280 376 aaKnown RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 CHST15Q7LFX5 561 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 TRIM46Q7Z4K8 759 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ITIH5Q86UX2 942 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms