RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 ALDOAP04075 364 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 S100A8P05109 93 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 NUDT7P0C024 238 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 MLNP12872 115 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 HLA-EP13747 358 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 PTPN5P54829 565 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 HUNKP57058 714 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 NKX3-2P78367 333 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 GPR50Q13585 617 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 BAK1Q16611 211 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 FLYWCH1Q4VC44 716 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 KLHL26Q53HC5 615 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 FAM26DQ5JW98 314 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 INTS5Q6P9B9 1019 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 CES3Q6UWW8 571 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 SLC16A12Q6ZSM3 486 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 CUZD1Q86UP6 607 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 FAM126BQ8IXS8 530 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 WDSUB1Q8N9V3 476 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 TTC29Q8NA56 475 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 NANPQ8TBE9 248 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 UTP15Q8TED0 518 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 NECTIN4Q96NY8 510 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 MRPL57Q9BQC6 102 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 CNPPD1Q9BV87 410 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 STRA6Q9BX79 667 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 SLIRPQ9GZT3 109 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 MORF4L1Q9UBU8 362 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 ENOPH1Q9UHY7 261 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 GSTK1Q9Y2Q3 226 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 CIB4A0PJX0 185 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 CCNDBP1O95273 360 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 FGRP09769 529 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 AXLP30530 894 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 CD79BP40259 229 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 CSKP41240 450 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 DPP6P42658 865 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 IDH2P48735 452 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 RAB13P51153 203 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 PARP15Q460N3 678 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 SYT6Q5T7P8 510 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 ALKBH2Q6NS38 261 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 TMEM65Q6PI78 240 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 PAMR1Q6UXH9 720 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 C11orf96Q7Z7L8 435 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 TXNRD3Q86VQ6 643 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 TMEM17Q86X19 198 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 EPHX4Q8IUS5 362 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 OR6C4Q8NGE1 309 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF606Q8WXB4 792 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 SLCO4A1Q96BD0 722 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 PHF21BQ96EK2 531 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 SLC19A3Q9BZV2 496 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 SERHLQ9NQF3 203 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 DMAC2Q9NW81 257 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 VAV3Q9UKW4 847 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 PPIEQ9UNP9 301 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 AKAP12Q02952 1782 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 WASHC1A8K0Z3 465 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 PRMT5O14744 637 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 PPM1BO75688 479 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF682O95780 498 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 COL6A1P12109 1028 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 XPAP23025 273 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 LCN1P31025 176 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 RRAS2P62070 204 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 CDK5R2Q13319 367 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 AKIRIN2Q53H80 203 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 ZC3H12BQ5HYM0 836 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 ATF7IP2Q5U623 682 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 MOB2Q70IA6 237 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 OR6M1Q8NGM8 313 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 C9orf43Q8TAL5 461 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 PTP4A1Q93096 173 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 TRIM43Q96BQ3 446 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 NXPE2Q96DL1 559 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 SCRN2Q96FV2 425 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 KCTD15Q96SI1 283 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 TRMOQ9BU70 441 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 FTHL17Q9BXU8 183 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 SDCBP2Q9H190 292 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 CATSPERBQ9H7T0 1116 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.06□□□□□ -1.127e-7■■■■□ 21.8
CRNKL1-205ENST00000496549 HSPE1-MOB4S4R3N1 261 aa8.06□□□□□ -1.12
CRNKL1-205ENST00000496549 FAM86B1E9PN63 330 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 L7N2F9 121 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 ST8SIA5O15466 376 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 OAZ2O95190 189 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 HTR3BO95264 441 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 IFNA4P05014 189 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 ITGB1P05556 798 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 HDCP19113 662 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 GPD1P21695 349 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 ACADLP28330 430 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 SFNP31947 248 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 ATP12AP54707 1039 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 CSHL1Q14406 222 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 CLLU1Q5K131 121 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 TEX261Q6UWH6 196 aa8.05□□□□□ -1.12
CRNKL1-205ENST00000496549 KDM1BQ8NB78 822 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms