RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TAF15Q92804 592 aaKnown RBP eCLIP3.56□□□□□ -1.84
CLK1-214ENST00000496205 ZNF653Q96CK0 615 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 SPDL1Q96EA4 605 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 ARSGQ96EG1 525 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 SIPA1Q96FS4 1042 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 FAM81BQ96LP2 452 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 MS4A10Q96PG2 267 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 DESI2Q9BSY9 194 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 NUP85Q9BW27 656 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 DBNDD1Q9H9R9 158 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 Q9N2K0 584 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 SMARCAL1Q9NZC9 954 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 RNF150Q9ULK6 438 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 ISY1Q9ULR0 285 aaKnown RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 PCDHAC2Q9Y5I4 1007 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 IGLV5-37A0A075B6J1 123 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 A0A0G2JPF8 293 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 LILRA5A6NI73 299 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 HNRNPCL3B7ZW38 293 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 PTGESO14684 152 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 EIF3DO15371 548 aaKnown RBP eCLIP3.55□□□□□ -1.84
CLK1-214ENST00000496205 SLC7A4O43246 635 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 WDR1O75083 606 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 HNRNPCL4P0DMR1 293 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 ACHEP22303 614 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 ATP5DP30049 168 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 HOXC13P31276 330 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 CDK3Q00526 305 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 DSC1Q08554 894 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 MZT1Q08AG7 82 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 ACSM1Q08AH1 577 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 ZNF234Q14588 700 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 ZNF273Q14593 569 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 ZNF672Q499Z4 452 aaPredicted RBP3.55□□□□□ -1.84
CLK1-214ENST00000496205 GRTP1Q5TC63 336 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 PPP1R21Q6ZMI0 780 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 FAM114A1Q8IWE2 563 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 GBGT1Q8N5D6 347 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 ZNF713Q8N859 430 aaPredicted RBP3.55□□□□□ -1.84
CLK1-214ENST00000496205 SLC4A11Q8NBS3 891 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 CAMKVQ8NCB2 501 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 LILRB1Q8NHL6 650 aaPredicted RBP3.55□□□□□ -1.84
CLK1-214ENST00000496205 GOT1L1Q8NHS2 421 aaPredicted RBP3.55□□□□□ -1.84
CLK1-214ENST00000496205 OLIG1Q8TAK6 271 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 HDAC11Q96DB2 347 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 ZNF558Q96NG5 402 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 MUS81Q96NY9 551 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 INPP4AQ96PE3 977 aaPredicted RBP3.55□□□□□ -1.84
CLK1-214ENST00000496205 OR1F2PQ96R84 312 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 SLX1AQ9BQ83 275 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 LRMDAQ9H2I8 198 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 MYNNQ9NPC7 610 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 DNAJB9Q9UBS3 223 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 RASAL2Q9UJF2 1139 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 RALYQ9UKM9 306 aaKnown RBP3.55□□□□□ -1.84
CLK1-214ENST00000496205 NFS1Q9Y697 457 aa3.55□□□□□ -1.84
CLK1-214ENST00000496205 FLT1P17948 1338 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 ZCWPW2A0A1B0GU75 182 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 TRIM64A6NGJ6 449 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 TRIM64BA6NI03 449 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 HTATSF1O43719 755 aaKnown RBP3.54□□□□□ -1.84
CLK1-214ENST00000496205 MED24O75448 989 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 FAM106CPP0CH98 169 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 ACP2P11117 423 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 CBLP22681 906 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 HOXC8P31273 242 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 GP5P40197 560 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 PRKCIP41743 596 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 MATR3P43243 847 aaKnown RBP eCLIP3.54□□□□□ -1.84
CLK1-214ENST00000496205 RAB28P51157 221 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 MMP15P51511 669 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 WASHC5Q12768 1159 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 GAGE2BQ13066 116 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 ZBTB17Q13105 803 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 PPIGQ13427 754 aaKnown RBP eCLIP3.54□□□□□ -1.84
CLK1-214ENST00000496205 TNIP1Q15025 636 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 GAGE2EQ4V326 116 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 ARMC4Q5T2S8 1044 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 MPP7Q5T2T1 576 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 FAM109BQ6ICB4 259 aaPredicted RBP3.54□□□□□ -1.84
CLK1-214ENST00000496205 GAGE2AQ6NT46 116 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 PLXDC2Q6UX71 529 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 MEX3BQ6ZN04 569 aaKnown RBP3.54□□□□□ -1.84
CLK1-214ENST00000496205 TMPRSS11FQ6ZWK6 438 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 IQCA1Q86XH1 822 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 RNF113BQ8IZP6 322 aaKnown RBP3.54□□□□□ -1.84
CLK1-214ENST00000496205 CCAR2Q8N163 923 aaKnown RBP3.54□□□□□ -1.84
CLK1-214ENST00000496205 ANKRD13CQ8N6S4 541 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 OR5M8Q8NGP6 311 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 SEMA4DQ92854 862 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 PHF21AQ96BD5 680 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 MTBPQ96DY7 904 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 SLC25A23Q9BV35 468 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 FNDC11Q9BVV2 318 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 C1QTNF4Q9BXJ3 329 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 FZD8Q9H461 694 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 HHATLQ9HCP6 504 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 MIOSQ9NXC5 875 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 EPS15L1Q9UBC2 864 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms