RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	RPA4	Q13156	261 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	GBX1	Q14549	363 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	KIR2DS5	Q14953	304 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	SEPT7	Q16181	437 aa	Known RBP	11.63	□□□□□ -0.55
APTX-233	ENST00000496030	RPE65	Q16518	533 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	PTRHD1	Q6GMV3	140 aa	Known RBP	11.63	□□□□□ -0.55
APTX-233	ENST00000496030	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.63	□□□□□ -0.55
APTX-233	ENST00000496030	VRK3	Q8IV63	474 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	ACVR1C	Q8NER5	493 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	ELMO1	Q92556	727 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	GLMN	Q92990	594 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	SLC30A3	Q99726	388 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	WWP1	Q9H0M0	922 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.63	□□□□□ -0.55
APTX-233	ENST00000496030	PPAN	Q9NQ55	473 aa	Known RBP	11.63	□□□□□ -0.55
APTX-233	ENST00000496030	GNPTG	Q9UJJ9	305 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	VPS9D1	Q9Y2B5	631 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	OR5K4	A6NMS3	321 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	PDZK1P1	A8MUH7	402 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	LIN7A	O14910	233 aa	Predicted RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	PFDN6	O15212	129 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	RRP8	O43159	456 aa	Known RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	B4GAT1	O43505	415 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	SLCO2B1	O94956	709 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	GLB1	P16278	677 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	ACADL	P28330	430 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	DUSP3	P51452	185 aa	Predicted RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	CLCN7	P51798	805 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	TUBB4B	P68371	445 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	CXADR	P78310	365 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	DAB2	P98082	770 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	TLE3	Q04726	772 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	NR1D2	Q14995	579 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	BRD3	Q15059	726 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	KBTBD12	Q3ZCT8	623 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	RBM20	Q5T481	1227 aa	Known RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	SLC26A11	Q86WA9	606 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	ZC3HC1	Q86WB0	502 aa	Known RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	TMPRSS12	Q86WS5	348 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	GSPT2	Q8IYD1	628 aa	Known RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	SLC22A15	Q8IZD6	547 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	GIMAP7	Q8NHV1	300 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	SNIP1	Q8TAD8	396 aa	Known RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	IFI44	Q8TCB0	444 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	FBF1	Q8TES7	1133 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	CCDC74A	Q96AQ1	378 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	AARSD1	Q9BTE6	412 aa	Known RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	EPB41L4B	Q9H329	900 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	VPS37B	Q9H9H4	285 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	SARS2	Q9NP81	518 aa	Known RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	ZFAT	Q9P243	1243 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	LRIT1	Q9P2V4	623 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	CPNE7	Q9UBL6	633 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	PCDHGA1	Q9Y5H4	931 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030		V9GYY5	206 aa	Predicted RBP	11.62	□□□□□ -0.55
APTX-233	ENST00000496030	DOPEY2	Q9Y3R5	2298 aa		11.62	□□□□□ -0.55
APTX-233	ENST00000496030		A0A1W2PQM1	296 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030		H3BMM5	538 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	ERVH48-1	M5A8F1	160 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	SPAG6	O75602	509 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	GP1BA	P07359	652 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	PNLIP	P16233	465 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	CD151	P48509	253 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	PGGT1B	P53609	377 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	CDKN2D	P55273	166 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	VSNL1	P62760	191 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	ILK	Q13418	452 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	BOP1	Q14137	746 aa	Known RBP	11.61	□□□□□ -0.55
APTX-233	ENST00000496030	LY6D	Q14210	128 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	NAA30	Q147X3	362 aa	Predicted RBP	11.61	□□□□□ -0.55
APTX-233	ENST00000496030	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
APTX-233	ENST00000496030	ERCC6L	Q2NKX8	1250 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	TAF1B	Q53T94	588 aa	Predicted RBP	11.61	□□□□□ -0.55
APTX-233	ENST00000496030	DUS1L	Q6P1R4	473 aa	Known RBP	11.61	□□□□□ -0.55
APTX-233	ENST00000496030	CEP128	Q6ZU80	1094 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	STRA8	Q7Z7C7	330 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	OR6C4	Q8NGE1	309 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	MAPK15	Q8TD08	544 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	ASZ1	Q8WWH4	475 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	KCNJ9	Q92806	393 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	NAT6	Q93015	286 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	FAM136A	Q96C01	138 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	PANX3	Q96QZ0	392 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	NDN	Q99608	321 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	SLC40A1	Q9NP59	571 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	KLHL42	Q9P2K6	505 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	DHRS7	Q9Y394	339 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	CFAP20	Q9Y6A4	193 aa	Known RBP	11.61	□□□□□ -0.55
APTX-233	ENST00000496030	COMMD10	Q9Y6G5	202 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	AK5	Q9Y6K8	562 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030	BOD1L1	Q8NFC6	3051 aa		11.61	□□□□□ -0.55
APTX-233	ENST00000496030		B8ZZF3	427 aa		11.6	□□□□□ -0.55
APTX-233	ENST00000496030		F8W8V4	182 aa		11.6	□□□□□ -0.55
APTX-233	ENST00000496030	NTN3	O00634	580 aa	Predicted RBP	11.6	□□□□□ -0.55
APTX-233	ENST00000496030	OPA1	O60313	960 aa		11.6	□□□□□ -0.55
APTX-233	ENST00000496030	RFPL3	O75679	317 aa		11.6	□□□□□ -0.55
APTX-233	ENST00000496030	FAM155B	O75949	473 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms