RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 PRELID2Q8N945 189 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 ACVR1CQ8NER5 493 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 OR6P1Q8NGX9 317 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 HEXDCQ8WVB3 486 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 LCN9Q8WX39 176 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 STARD8Q92502 1023 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 ELMO1Q92556 727 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 UBXN4Q92575 508 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 TFGQ92734 400 aaPredicted RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 MS4A14Q96JA4 679 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 RANBP9Q96S59 729 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 C19orf43Q9BQ61 176 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 TRIM56Q9BRZ2 755 aaKnown RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 ZPBPQ9BS86 351 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 FRMD8P1Q9BZ68 369 aaPredicted RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 SRMSQ9H3Y6 488 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 SEMA5BQ9P283 1151 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 CROTQ9UKG9 612 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 DRG1Q9Y295 367 aaKnown RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 COLEC10Q9Y6Z7 277 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 PIEZO2Q9H5I5 2752 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 COL6A6A6NMZ7 2263 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 KALRNO60229 2985 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 SMG1Q96Q15 3661 aaKnown RBP10.31□□□□□ -0.76
NELFE-213ENST00000494956 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
NELFE-213ENST00000494956 IFRD1O00458 451 aaPredicted RBP10.31□□□□□ -0.76
NELFE-213ENST00000494956 KATNA1O75449 491 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 ITGB2P05107 769 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 ST6GAL1P15907 406 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 CDH3P22223 829 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 MGAT1P26572 445 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 NDUFS1P28331 727 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 DLSTP36957 453 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 NSG1P42857 185 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 ARL4DP49703 201 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 RPS18P62269 152 aaKnown RBP10.31□□□□□ -0.76
NELFE-213ENST00000494956 ACVR1Q04771 509 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 ABHD18Q0P651 414 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 CDC20Q12834 499 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 ITIH4Q14624 930 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 COLEC12Q5KU26 742 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 LCN10Q6JVE6 187 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 ARMC6Q6NXE6 501 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 TTC27Q6P3X3 843 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 KLHL35Q6PF15 583 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 DRICH1Q6PGQ1 229 aaPredicted RBP10.31□□□□□ -0.76
NELFE-213ENST00000494956 AFTPHQ6ULP2 937 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 PACS1Q6VY07 963 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 ZNF605Q86T29 641 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 TRIM73Q86UV7 250 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 PPP1R3BQ86XI6 285 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 FAM20CQ8IXL6 584 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 ADGRF3Q8IZF5 1079 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 D2HGDHQ8N465 521 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 TRIM58Q8NG06 486 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 OR4L1Q8NH43 312 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 CT55Q8WUE5 264 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 KIAA1143Q96AT1 154 aaPredicted RBP10.31□□□□□ -0.76
NELFE-213ENST00000494956 STAMBPL1Q96FJ0 436 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 SLC45A3Q96JT2 553 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 AP1M1Q9BXS5 423 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 FGF21Q9NSA1 209 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 SOHLH2Q9NX45 425 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 SYBUQ9NX95 663 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 POMT2Q9UKY4 750 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 RARRES3Q9UL19 164 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 ICKQ9UPZ9 632 aa10.31□□□□□ -0.76
NELFE-213ENST00000494956 CCDC88CQ9P219 2028 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 SLC5A10A0PJK1 596 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 KLHL33A6NCF5 533 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 KRT87PA6NCN2 255 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 ZNF891A8MT65 544 aaPredicted RBP10.3□□□□□ -0.76
NELFE-213ENST00000494956 GOLGA8KD6RF30 607 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 GOLGA8TH3BQL2 631 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 TERTO14746 1132 aaKnown RBP10.3□□□□□ -0.76
NELFE-213ENST00000494956 AVILO75366 819 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 AP2A2O94973 939 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 GAS8O95995 478 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 ACADLP28330 430 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 PRDX3P30048 256 aaKnown RBP10.3□□□□□ -0.76
NELFE-213ENST00000494956 CCR7P32248 378 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 PRAMEP78395 509 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 HSD11B2P80365 405 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 ABRQ12979 859 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 ERV3-1Q14264 604 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 IL11RAQ14626 422 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 DEFB109BQ30KR1 87 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.3□□□□□ -0.76
NELFE-213ENST00000494956 FASTKD1Q53R41 847 aaKnown RBP10.3□□□□□ -0.76
NELFE-213ENST00000494956 PCID2Q5JVF3 399 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 FAM69BQ5VUD6 431 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 ANKRD22Q5VYY1 191 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 REXO1L1PQ8IX06 675 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 MPP5Q8N3R9 675 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 ESX1Q8N693 406 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 SLC38A9Q8NBW4 561 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 PPHLN1Q8NEY8 458 aaKnown RBP10.3□□□□□ -0.76
NELFE-213ENST00000494956 ZFPM2Q8WW38 1151 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 ZNF501Q96CX3 271 aaPredicted RBP10.3□□□□□ -0.76
NELFE-213ENST00000494956 MFSD3Q96ES6 412 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms