RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ASF1AQ9Y294 204 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 SAR1BQ9Y6B6 198 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 ITPR1Q14643 2758 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 EIF4E1BA6NMX2 242 aaKnown RBP17.17■□□□□ 0.34
HDAC4-211ENST00000494800 KPNA5O15131 536 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 KIF1CO43896 1103 aaKnown RBP17.17■□□□□ 0.34
HDAC4-211ENST00000494800 RPN2P04844 631 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 APOA4P06727 396 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 NELFEP18615 380 aaKnown RBP17.17■□□□□ 0.34
HDAC4-211ENST00000494800 RHDQ02161 417 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 SEMA3AQ14563 771 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 TMTC4Q5T4D3 741 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 ANKRD22Q5VYY1 191 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 PCGF5Q86SE9 256 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 PPIL6Q8IXY8 311 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 CACNA2D3Q8IZS8 1091 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 SIDT2Q8NBJ9 832 aaKnown RBP17.17■□□□□ 0.34
HDAC4-211ENST00000494800 SNRNP27Q8WVK2 155 aaKnown RBP17.17■□□□□ 0.34
HDAC4-211ENST00000494800 MFSD3Q96ES6 412 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 OR6C1Q96RD1 312 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 TCF12Q99081 682 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 HGH1Q9BTY7 390 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 PDE7BQ9NP56 450 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 SIDT1Q9NXL6 827 aaKnown RBP17.17■□□□□ 0.34
HDAC4-211ENST00000494800 ASIC3Q9UHC3 531 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 VPS9D1Q9Y2B5 631 aa17.17■□□□□ 0.34
HDAC4-211ENST00000494800 SLC5A10A0PJK1 596 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 GSAPA4D1B5 854 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 GOLGA8MH3BSY2 632 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 RAD1O60671 282 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 AVILO75366 819 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 TMEM63AO94886 807 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 ITGB6P18564 788 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 POLR2CP19387 275 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 MAP4P27816 1152 aaKnown RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 PAFAH1B1P43034 410 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 HSD11B2P80365 405 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 ACY1Q03154 408 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 HSPA14Q0VDF9 509 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 PAPD7Q5XG87 772 aaKnown RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 KIAA0930Q6ICG6 404 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 LDB1Q86U70 411 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 CAND1Q86VP6 1230 aaKnown RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 HOOK3Q86VS8 718 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 BPHLQ86WA6 291 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 AMIGO1Q86WK6 493 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 RASGRP3Q8IV61 690 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 TBC1D21Q8IYX1 336 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 NLGN4XQ8N0W4 816 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 PHC3Q8NDX5 983 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 NLGN4YQ8NFZ3 816 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 OR52E1Q8NGJ3 308 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 NKD1Q969G9 470 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 KIAA1143Q96AT1 154 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 SLC41A2Q96JW4 573 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 CAPZA3Q96KX2 299 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 SERPINB12Q96P63 405 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 MAP3K3Q99759 626 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 ULBP3Q9BZM4 244 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 APMAPQ9HDC9 416 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 SEMA5BQ9P283 1151 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 MARCH4Q9P2E8 410 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-211ENST00000494800 PYCARDQ9ULZ3 195 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 NEU2Q9Y3R4 380 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 CHD6Q8TD26 2715 aa17.16■□□□□ 0.34
HDAC4-211ENST00000494800 IGHV5-51A0A0C4DH38 117 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 FAM237BA0A1B0GVD1 139 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 H3BMM5 538 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 STK17BO94768 372 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 ZBTB11O95625 1053 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-211ENST00000494800 CDH3P22223 829 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 RPS3P23396 243 aaKnown RBP eCLIP17.15■□□□□ 0.34
HDAC4-211ENST00000494800 SHMT2P34897 504 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 PPP1CAP62136 330 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 PRKG2Q13237 762 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 TUBB3Q13509 450 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 DHX34Q14147 1143 aaKnown RBP17.15■□□□□ 0.34
HDAC4-211ENST00000494800 KCTD19Q17RG1 926 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-211ENST00000494800 DNAJC21Q5F1R6 531 aaKnown RBP17.15■□□□□ 0.34
HDAC4-211ENST00000494800 CES3Q6UWW8 571 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 SYDE1Q6ZW31 735 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-211ENST00000494800 VASH2Q86V25 355 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 PPP1R3BQ86XI6 285 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 OR5K2Q8NHB8 316 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 SLCO2A1Q92959 643 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 EFHD1Q9BUP0 239 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 DDX47Q9H0S4 455 aaKnown RBP17.15■□□□□ 0.34
HDAC4-211ENST00000494800 SOHLH2Q9NX45 425 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 RNF14Q9UBS8 474 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 PCYOX1Q9UHG3 505 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 PILRAQ9UKJ1 303 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 RARRES3Q9UL19 164 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 TMEM184BQ9Y519 407 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-211ENST00000494800 MAD1L1Q9Y6D9 718 aa17.15■□□□□ 0.34
HDAC4-211ENST00000494800 C2orf74A8MZ97 194 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 ERVH48-1M5A8F1 160 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 OGNP20774 298 aaKnown RBP17.14■□□□□ 0.33
HDAC4-211ENST00000494800 ACADLP28330 430 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 CCR7P32248 378 aa17.14■□□□□ 0.33
HDAC4-211ENST00000494800 CSE1LP55060 971 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms