RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 WASH2PQ6VEQ5 465 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 TMEM26Q6ZUK4 368 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 PDZD3Q86UT5 571 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 LRRC6Q86X45 466 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 CNTN4Q8IWV2 1026 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 C2orf73Q8N5S3 287 aaPredicted RBP10.85□□□□□ -0.67
APTX-230ENST00000494649 PPM1NQ8N819 430 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 ASZ1Q8WWH4 475 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 SEMA6CQ9H3T2 930 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 WASH6PQ9NQA3 447 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 POT1Q9NUX5 634 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 CSO75390 466 aaKnown RBP10.85□□□□□ -0.67
APTX-230ENST00000494649 AMD1P17707 334 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 MCM3P25205 808 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 CD151P48509 253 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 CLCN7P51798 805 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 GFERP55789 205 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 E2F1Q01094 437 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 ILKQ13418 452 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 UAP1Q16222 522 aaPredicted RBP10.85□□□□□ -0.67
APTX-230ENST00000494649 PHF19Q5T6S3 580 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 ZNF449Q6P9G9 518 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 LMNTD2Q8IXW0 634 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 CPNE9Q8IYJ1 553 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 ZBTB2Q8N680 514 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 OR4E2Q8NGC2 313 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 OR6C4Q8NGE1 309 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 RNF31Q96EP0 1072 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 ELMO2Q96JJ3 720 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 OLFM1Q99784 485 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 AARSD1Q9BTE6 412 aaKnown RBP10.85□□□□□ -0.67
APTX-230ENST00000494649 UNKQ9C0B0 810 aaKnown RBP10.85□□□□□ -0.67
APTX-230ENST00000494649 ANKZF1Q9H8Y5 726 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 CAB39LQ9H9S4 337 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 VPS9D1Q9Y2B5 631 aa10.85□□□□□ -0.67
APTX-230ENST00000494649 D6RAR5 112 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 GPC4O75487 556 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 UBXN7O94888 489 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 SLU7O95391 586 aaKnown RBP10.84□□□□□ -0.67
APTX-230ENST00000494649 HGFP14210 728 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 ACADLP28330 430 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 BDKRB1P46663 353 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 ADARP55265 1226 aaKnown RBP10.84□□□□□ -0.67
APTX-230ENST00000494649 TIAL1Q01085 375 aaKnown RBP eCLIP10.84□□□□□ -0.67
APTX-230ENST00000494649 TMED2Q15363 201 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 KLHL38Q2WGJ6 581 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 CCSMST1Q4G0I0 132 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 ZNF574Q6ZN55 896 aaPredicted RBP10.84□□□□□ -0.67
APTX-230ENST00000494649 RBM44Q6ZP01 1051 aaKnown RBP10.84□□□□□ -0.67
APTX-230ENST00000494649 SLC22A15Q8IZD6 547 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 TGM7Q96PF1 710 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 OGFRQ9NZT2 677 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 SLC24A2Q9UI40 661 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 PTPRBP23467 1997 aa10.84□□□□□ -0.67
APTX-230ENST00000494649 KLHL33A6NCF5 533 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 F8W8V4 182 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 NTN3O00634 580 aaPredicted RBP10.83□□□□□ -0.68
APTX-230ENST00000494649 VPS26AO75436 327 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 PNLIPP16233 465 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 GMPRP36959 345 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 RPA4Q13156 261 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 COL9A2Q14055 689 aaPredicted RBP10.83□□□□□ -0.68
APTX-230ENST00000494649 NAA30Q147X3 362 aaPredicted RBP10.83□□□□□ -0.68
APTX-230ENST00000494649 HECTD2Q5U5R9 776 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 IRGCQ6NXR0 463 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 FAM92BQ6ZTR7 304 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 TMPRSS7Q7RTY8 843 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 PIWIL4Q7Z3Z4 852 aaKnown RBP10.83□□□□□ -0.68
APTX-230ENST00000494649 TAX1BP1Q86VP1 789 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 ZC3HC1Q86WB0 502 aaKnown RBP10.83□□□□□ -0.68
APTX-230ENST00000494649 OR52E1Q8NGJ3 308 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 GABPB2Q8TAK5 448 aaPredicted RBP10.83□□□□□ -0.68
APTX-230ENST00000494649 CD200R1Q8TD46 325 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 CDKL2Q92772 493 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 KCNJ9Q92806 393 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 PPM1MQ96MI6 270 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 IL17FQ96PD4 163 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 LATS2Q9NRM7 1088 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 TXNDC16Q9P2K2 825 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 WASF3Q9UPY6 502 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 LAMA5O15230 3695 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 FAM95CA0A1B0GW59 222 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 OR6C74A6NCV1 312 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 H3BMM5 538 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 DUX1O43812 170 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 KIF1CO43896 1103 aaKnown RBP10.83□□□□□ -0.68
APTX-230ENST00000494649 SLCO2B1O94956 709 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 CPNE6O95741 557 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 C1QAP02745 245 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 MPOP05164 745 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 PROS1P07225 676 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 GPR3P46089 330 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 ISXQ2M1V0 245 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 ERCC6LQ2NKX8 1250 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 C3orf38Q5JPI3 329 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 FBXO38Q6PIJ6 1188 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 PAQR3Q6TCH7 311 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 KIAA0408Q6ZU52 694 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 GALNT15Q8N3T1 639 aa10.83□□□□□ -0.68
APTX-230ENST00000494649 LCN9Q8WX39 176 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms