RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 TJP3O95049 919 aa23.2■■□□□ 1.3
TTC3-224ENST00000494243 PRSS56P0CW18 603 aa23.2■■□□□ 1.3
TTC3-224ENST00000494243 CDH3P22223 829 aa23.2■■□□□ 1.3
TTC3-224ENST00000494243 PDHA2P29803 388 aa23.2■■□□□ 1.3
TTC3-224ENST00000494243 PRDX3P30048 256 aaKnown RBP23.2■■□□□ 1.3
TTC3-224ENST00000494243 PRKAA1Q13131 559 aa23.2■■□□□ 1.3
TTC3-224ENST00000494243 DSELQ8IZU8 1212 aa23.2■■□□□ 1.3
TTC3-224ENST00000494243 PHC3Q8NDX5 983 aa23.2■■□□□ 1.3
TTC3-224ENST00000494243 PPP1R2P1Q96PQ5 205 aa23.2■■□□□ 1.3
TTC3-224ENST00000494243 MLXIPLQ9NP71 852 aa23.2■■□□□ 1.3
TTC3-224ENST00000494243 NAV2Q8IVL1 2488 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 H7C0S8 307 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 MEN1O00255 615 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 MATN2O00339 956 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 BTN3A1O00481 513 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 KLK3P07288 261 aaPredicted RBP23.19■■□□□ 1.3
TTC3-224ENST00000494243 MSL3P1P0C860 447 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 ACRV1P26436 265 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 RORAP35398 523 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 GSDMDP57764 484 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 CHAF1BQ13112 559 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 SERPINA9Q86WD7 417 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 CLDN19Q8N6F1 224 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 OR1L3Q8NH93 324 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 ADAMTS17Q8TE56 1095 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 CPT1BQ92523 772 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 PITPNM3Q9BZ71 974 aa23.19■■□□□ 1.3
TTC3-224ENST00000494243 TFB2MQ9H5Q4 396 aaKnown RBP23.19■■□□□ 1.3
TTC3-224ENST00000494243 NLE1Q9NVX2 485 aaPredicted RBP23.19■■□□□ 1.3
TTC3-224ENST00000494243 TNRC6AQ8NDV7 1962 aaKnown RBP23.18■■□□□ 1.3
TTC3-224ENST00000494243 GSAPA4D1B5 854 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 GRID2IPA4D2P6 1211 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 METTL18O95568 372 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 CAPN1P07384 714 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 RAB40ALP0C0E4 278 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 ST6GAL1P15907 406 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 TPH1P17752 444 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 CD151P48509 253 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 NAP1L1P55209 391 aaKnown RBP23.18■■□□□ 1.3
TTC3-224ENST00000494243 PARP6Q2NL67 630 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 ZRANB3Q5FWF4 1079 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 TMTC1Q8IUR5 882 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 PIANPQ8IYJ0 282 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 OR52E1Q8NGJ3 308 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 ING2Q9H160 280 aa23.18■■□□□ 1.3
TTC3-224ENST00000494243 SPTBP11277 2137 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 ARGFXA6NJG6 315 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 CETN2P41208 172 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 PREPP48147 710 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 BOP1Q14137 746 aaKnown RBP23.17■■□□□ 1.3
TTC3-224ENST00000494243 FAM69BQ5VUD6 431 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 RAD9BQ6WBX8 426 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 ADGRF3Q8IZF5 1079 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 ENDOVQ8N8Q3 282 aaKnown RBP23.17■■□□□ 1.3
TTC3-224ENST00000494243 FAM71DQ8N9W8 422 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 CDKN2AIPNLQ96HQ2 116 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 TRAPPC9Q96Q05 1148 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 NLNQ9BYT8 704 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 MVB12BQ9H7P6 319 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 FANCEQ9HB96 536 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 SYTL2Q9HCH5 934 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 PCMTD2Q9NV79 361 aa23.17■■□□□ 1.3
TTC3-224ENST00000494243 PCDHGA9Q9Y5G4 932 aaKnown RBP23.17■■□□□ 1.3
TTC3-224ENST00000494243 TMEM150CB9EJG8 249 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 IFRD1O00458 451 aaPredicted RBP23.16■■□□□ 1.3
TTC3-224ENST00000494243 PVRP15151 417 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 PTGIRP43119 386 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 CCL11P51671 97 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 RPA4Q13156 261 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 DBN1Q16643 649 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 PAPD7Q5XG87 772 aaKnown RBP23.16■■□□□ 1.3
TTC3-224ENST00000494243 ARHGEF18Q6ZSZ5 1173 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 TAS2R42Q7RTR8 314 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 AMIGO1Q86WK6 493 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 TFGQ92734 400 aaPredicted RBP23.16■■□□□ 1.3
TTC3-224ENST00000494243 CLIP3Q96DZ5 547 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 SLC25A23Q9BV35 468 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 KLHL25Q9H0H3 589 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 XKR8Q9H6D3 395 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 VPS37BQ9H9H4 285 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 TCFL5Q9UL49 500 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 MED13Q9UHV7 2174 aa23.16■■□□□ 1.3
TTC3-224ENST00000494243 ZNF189O75820 626 aaPredicted RBP23.15■■□□□ 1.3
TTC3-224ENST00000494243 PSMA3P25788 255 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 LMAN1P49257 510 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 ZNF75DP51815 510 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 PGDP52209 483 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 PRKG2Q13237 762 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 FAM198BQ6UWH4 519 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 FAM26EQ8N5C1 309 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 ACRBPQ8NEB7 543 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 LRRC40Q9H9A6 602 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 ACTR5Q9H9F9 607 aaPredicted RBP23.15■■□□□ 1.3
TTC3-224ENST00000494243 ACSS2Q9NR19 701 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 SNX7Q9UNH6 387 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 LRRK2Q5S007 2527 aa23.15■■□□□ 1.3
TTC3-224ENST00000494243 C2orf74A8MZ97 194 aa23.14■■□□□ 1.29
TTC3-224ENST00000494243 CEACAM4O75871 244 aa23.14■■□□□ 1.29
TTC3-224ENST00000494243 VAV2P52735 878 aa23.14■■□□□ 1.29
TTC3-224ENST00000494243 GDF10P55107 478 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms