RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 TCRBV7S3A2A0A539 114 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 H7C0S8 307 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 POLR1CO15160 346 aaPredicted RBP12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 SEC31AO94979 1220 aaKnown RBP12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 POLBP06746 335 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 FAM87AP0C7U9 286 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 PLA2G2AP14555 144 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 ITGB6P18564 788 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 ITGALP20701 1170 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 GRIA1P42261 906 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 MAGEA6P43360 314 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 PRLHRP49683 370 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 ATP1A2P50993 1020 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 ITGA8P53708 1063 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 TUBB4BP68371 445 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 PDE1BQ01064 536 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 ANKRD22Q5VYY1 191 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 DUPD1Q68J44 220 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 IRGCQ6NXR0 463 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 CASC4Q6P4E1 433 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 SERPINA9Q86WD7 417 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 CFAP206Q8IYR0 622 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 NLGN4XQ8N0W4 816 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 CLDN19Q8N6F1 224 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 IL22RA1Q8N6P7 574 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 NAT8LQ8N9F0 302 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 NLGN4YQ8NFZ3 816 aaPredicted RBP12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 CDKN2AIPNLQ96HQ2 116 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 SLC41A2Q96JW4 573 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 PPM1MQ96MI6 270 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 ZPBPQ9BS86 351 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 BFARQ9NZS9 450 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 WHRNQ9P202 907 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 IL17BQ9UHF5 180 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 SLC24A2Q9UI40 661 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 CRLS1Q9UJA2 301 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 ACSL5Q9ULC5 683 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 CCDC78A2IDD5 438 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 OR51F1A6NGY5 319 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 TERTO14746 1132 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 NKX2-8O15522 239 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 RASSF9O75901 435 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 TMEM63AO94886 807 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 TIAF1O95411 115 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 ATP1B2P14415 290 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 FOLR1P15328 257 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 NELFEP18615 380 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 F8A1P23610 371 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 ACRV1P26436 265 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 IVDP26440 423 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 HADHAP40939 763 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 NPY2RP49146 381 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 CAV1Q03135 178 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 FOXM1Q08050 763 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 LAMB3Q13751 1172 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 KCNAB1Q14722 419 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 DBN1Q16643 649 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 GPR33Q49SQ1 333 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 CCDC38Q502W7 563 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 DNAJC21Q5F1R6 531 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 CACHD1Q5VU97 1274 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 HIBCHQ6NVY1 386 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 LRRC8BQ6P9F7 803 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 PDIK1LQ8N165 341 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 LRRN4CLQ8ND94 238 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 MCUQ8NE86 351 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 PPHLN1Q8NEY8 458 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 IFT81Q8WYA0 676 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 ULK4Q96C45 1275 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 ZDHHC12Q96GR4 267 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 C12orf66Q96MD2 445 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 OR6C1Q96RD1 312 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 COPS8Q99627 209 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 OR52A5Q9H2C5 316 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 CASS4Q9NQ75 786 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 ZDHHC3Q9NYG2 299 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 SAMD15Q9P1V8 674 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 MAD1L1Q9Y6D9 718 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 PRSS21Q9Y6M0 314 aa12.37□□□□□ -0.43
SEC61A1-206ENST00000491668 PIKFYVEQ9Y2I7 2098 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 ESYT3A0FGR9 886 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 CCDC162PA2VCL2 907 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 OR5K3A6NET4 321 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 FGF5P12034 268 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 MLNP12872 115 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 MAP4P27816 1152 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 PDHA2P29803 388 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 STAT5AP42229 794 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 PLTPP55058 493 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 ARL4CP56559 192 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 IL11RAQ14626 422 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 ZRANB3Q5FWF4 1079 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 IFT20Q8IY31 132 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 ZSCAN1Q8NBB4 408 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 OR13J1Q8NGT2 312 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 HM13Q8TCT9 377 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 UBXN4Q92575 508 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 DCUN1D1Q96GG9 259 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 ELMO2Q96JJ3 720 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms