RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ZNF397Q8NF99 534 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 FBXO18Q8NFZ0 1043 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 OR6C4Q8NGE1 309 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 OR2T3Q8NH03 318 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TMEM171Q8WVE6 324 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SMARCE1Q969G3 411 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 REPS1Q96D71 796 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SGF29Q96ES7 293 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TESK2Q96S53 571 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ATG101Q9BSB4 218 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SLITRK6Q9H5Y7 841 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 USP29Q9HBJ7 922 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 FOXJ2Q9P0K8 574 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SERGEFQ9UGK8 458 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 PCSK1NQ9UHG2 260 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 NR2E1Q9Y466 385 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TRIM17Q9Y577 477 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 OVOS2A0A0J9YW53 1432 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 OVOS2Q6IE36 1432 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 KRT87PA6NCN2 255 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 RRHO14718 337 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 NDUFS4O43181 175 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TGFAP01135 160 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 IVLP07476 585 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 KRT13P13646 458 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 ITIH1P19827 911 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 UBA1P22314 1058 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PTGER4P35408 488 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 CD151P48509 253 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 METAP2P50579 478 aaKnown RBP eCLIP2.88□□□□□ -1.953e-8■□□□□ 10.2
UBXN4-208ENST00000490163 SRSF3P84103 164 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TMED1Q13445 227 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PQLC2Q6ZP29 291 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 MAPKAPK5Q8IW41 473 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 SIDT2Q8NBJ9 832 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PSMA8Q8TAA3 256 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 CCDC114Q96M63 670 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PSKH2Q96QS6 385 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TAAR6Q96RI8 345 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 NUSAP1Q9BXS6 441 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 GALNT9Q9HCQ5 603 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 SLAMF7Q9NQ25 335 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TCF7L2Q9NQB0 619 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PRDM7Q9NQW5 492 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 KCTD5Q9NXV2 234 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 ATXN10Q9UBB4 475 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 ABT1Q9ULW3 272 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 SCN11AQ9UI33 1791 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 ROCK2O75116 1388 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PFASO15067 1338 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 A0A1W2PPE3 182 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PRPF4O43172 522 aaKnown RBP eCLIP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TLX3O43711 291 aaPredicted RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PRDM1O75626 825 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TPM3P06753 285 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 INHBAP08476 426 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 ELFN1P0C7U0 828 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 INSRRP14616 1297 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 CYP11B2P19099 503 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 HTR2AP28223 471 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 NDUFS1P28331 727 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 USP8P40818 1118 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 APOBEC1P41238 236 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 MTIF2P46199 727 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 UBE2HP62256 183 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TRA2BP62995 288 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 GRIK2Q13002 908 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TRDNQ13061 729 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 RIPK1Q13546 671 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 CBFBQ13951 182 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 KCNC3Q14003 757 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 DRAP1Q14919 205 aaPredicted RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 C2orf68Q2NKX9 166 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 ZSCAN23Q3MJ62 389 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PLAC9Q5JTB6 97 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 SYT10Q6XYQ8 523 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 BCDIN3DQ7Z5W3 292 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 SFTPA2Q8IWL1 248 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 FADS6Q8N9I5 356 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 CCDC112Q8NEF3 446 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 MAFAQ8NHW3 353 aaPredicted RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 ELP5Q8TE02 316 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 SIGLEC10Q96LC7 697 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 FAM210AQ96ND0 272 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 MS4A10Q96PG2 267 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TMEM39BQ9GZU3 492 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 ARHGEF38Q9NXL2 777 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 SPASTQ9UBP0 616 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 GRID1Q9ULK0 1009 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 PPIEQ9UNP9 301 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 RABL2BQ9UNT1 228 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 NOSIPQ9Y314 301 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 LSM4Q9Y4Z0 139 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 KLF2Q9Y5W3 355 aaPredicted RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 STON1Q9Y6Q2 735 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 SBF2Q86WG5 1849 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 EIF3AQ14152 1382 aaKnown RBP2.88□□□□□ -1.95
UBXN4-208ENST00000490163 USP47Q96K76 1375 aa2.88□□□□□ -1.95
UBXN4-208ENST00000490163 TRAV24A0A0B4J272 114 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 OR2M5A3KFT3 312 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms