RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 TUBD1Q9UJT1 453 aa11.48□□□□□ -0.57
SRSF4-204ENST00000489898 TCAF1Q9Y4C2 921 aa11.48□□□□□ -0.57
SRSF4-204ENST00000489898 PCDHB11Q9Y5F2 797 aa11.48□□□□□ -0.57
SRSF4-204ENST00000489898 KCNMB2Q9Y691 235 aa11.48□□□□□ -0.57
SRSF4-204ENST00000489898 CRYBG3Q68DQ2 2970 aa11.48□□□□□ -0.57
SRSF4-204ENST00000489898 TCRBV7S3A2A0A539 114 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 KRT87PA6NCN2 255 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 OR6C74A6NCV1 312 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 EIF4E1BA6NMX2 242 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 ERI2A8K979 691 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 J3QKU1 62 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 ARHGAP6O43182 974 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 ZNF189O75820 626 aaPredicted RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 RASSF9O75901 435 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 STK10O94804 968 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 GOT2P00505 430 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 SLC35G4P0C7Q5 338 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 PRKAR1AP10644 381 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 PVRP15151 417 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 CD151P48509 253 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 NAP1L1P55209 391 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 RPS18P62269 152 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 FOXM1Q08050 763 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 CDH17Q12864 832 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 KCNAB2Q13303 367 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 SEPT6Q14141 434 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 DNTTIP2Q5QJE6 756 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 FAM69BQ5VUD6 431 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 TTC27Q6P3X3 843 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 OOSP2Q86WS3 158 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 CFAP206Q8IYR0 622 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 CARFQ8N187 725 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 PRELID2Q8N945 189 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 LMNTD1Q8N9Z9 388 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 LINC01555Q8NAE3 123 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 SGSM3Q96HU1 749 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 TTC25Q96NG3 672 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 TRIM56Q9BRZ2 755 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 CCM2Q9BSQ5 444 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 HGH1Q9BTY7 390 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 TRIM55Q9BYV6 548 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 TRIM4Q9C037 500 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 P2RY12Q9H244 342 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 ADNPQ9H2P0 1102 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 TFB2MQ9H5Q4 396 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 FAM60AQ9NP50 221 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 LHX9Q9NQ69 397 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 EIF2B3Q9NR50 452 aaKnown RBP11.47□□□□□ -0.57
SRSF4-204ENST00000489898 LATS2Q9NRM7 1088 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 FGF21Q9NSA1 209 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 HRASLS2Q9NWW9 162 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 SPHK1Q9NYA1 384 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 GUCA1BQ9UMX6 200 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 NEU2Q9Y3R4 380 aa11.47□□□□□ -0.57
SRSF4-204ENST00000489898 CLEC18AA5D8T8 446 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 CNOT3O75175 753 aaKnown RBP11.46□□□□□ -0.57
SRSF4-204ENST00000489898 GPC4O75487 556 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 TMEM63AO94886 807 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 AP2A2O94973 939 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 POLBP06746 335 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 POLR2CP19387 275 aaPredicted RBP11.46□□□□□ -0.57
SRSF4-204ENST00000489898 NR1D1P20393 614 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 ITGAXP20702 1163 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 CCR7P32248 378 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 DLSTP36957 453 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 TUBB4BP68371 445 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 CRADDP78560 199 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 HSD11B2P80365 405 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 RPA4Q13156 261 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 DNASE1L3Q13609 305 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 TUBB2AQ13885 445 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 GBX1Q14549 363 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 PLCL1Q15111 1095 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 ZRANB3Q5FWF4 1079 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 CPZQ66K79 652 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 FAM199XQ6PEV8 388 aaPredicted RBP11.46□□□□□ -0.57
SRSF4-204ENST00000489898 C6orf15Q6UXA7 325 aaPredicted RBP11.46□□□□□ -0.57
SRSF4-204ENST00000489898 CLEC18BQ6UXF7 455 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 LDB1Q86U70 411 aaPredicted RBP11.46□□□□□ -0.57
SRSF4-204ENST00000489898 TRIM73Q86UV7 250 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 PPP1R3BQ86XI6 285 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 CLEC18CQ8NCF0 446 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 PHC3Q8NDX5 983 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 OR1L3Q8NH93 324 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 LRFN5Q96NI6 719 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 FCRL4Q96PJ5 515 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 TRAPPC9Q96Q05 1148 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 OR2A14Q96R47 310 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 TUBB2BQ9BVA1 445 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 FRMD8P1Q9BZ68 369 aaPredicted RBP11.46□□□□□ -0.57
SRSF4-204ENST00000489898 SLC25A18Q9H1K4 315 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 EPN3Q9H201 632 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 TRIT1Q9H3H1 467 aaKnown RBP11.46□□□□□ -0.57
SRSF4-204ENST00000489898 ACTL8Q9H568 366 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 XKR8Q9H6D3 395 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 SYNPO2LQ9H987 977 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 PCMTD2Q9NV79 361 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 LNPEPQ9UIQ6 1025 aa11.46□□□□□ -0.57
SRSF4-204ENST00000489898 NAV2Q8IVL1 2488 aa11.45□□□□□ -0.58
SRSF4-204ENST00000489898 GOLGA6L9A6NEM1 432 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms