RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	GOLGA8K	D6RF30	607 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	GOLGA8T	H3BQL2	631 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	CCDC188	H7C350	402 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	POLR1C	O15160	346 aa	Predicted RBP	10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	KIF1C	O43896	1103 aa	Known RBP	10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	APOA4	P06727	396 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	ITGB6	P18564	788 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	ARNT	P27540	789 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	ARCN1	P48444	511 aa	Known RBP	10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	SEPHS1	P49903	392 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	DR1	Q01658	176 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	HSPA14	Q0VDF9	509 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	DHX34	Q14147	1143 aa	Known RBP	10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	TMED2	Q15363	201 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	ANKRD20A4	Q4UJ75	823 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	RNASEH2B	Q5TBB1	312 aa	Known RBP	10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	ANKS6	Q68DC2	871 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	CEACAM20	Q6UY09	585 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	NAPRT	Q6XQN6	538 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	ZFAND4	Q86XD8	727 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	PHC3	Q8NDX5	983 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	OR4E2	Q8NGC2	313 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	ASZ1	Q8WWH4	475 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	UBXN4	Q92575	508 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	PMEPA1	Q969W9	287 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	PANX3	Q96QZ0	392 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	TCF12	Q99081	682 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	CD180	Q99467	661 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	CTRC	Q99895	268 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	SRMS	Q9H3Y6	488 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	TFB2M	Q9H5Q4	396 aa	Known RBP	10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	ASF1A	Q9Y294	204 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	B3GALT1	Q9Y5Z6	326 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	RPS6KL1	Q9Y6S9	549 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	UNC13C	Q8NB66	2214 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	ZNF106	Q9H2Y7	1883 aa	Known RBP	10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	UBA6	A0AVT1	1052 aa	Predicted RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	IQCF5	A8MTL0	148 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	MATN2	O00339	956 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	DNALI1	O14645	258 aa	Predicted RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	NELFE	P18615	380 aa	Known RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	RPS3	P23396	243 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	CCR7	P32248	378 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	PTGIR	P43119	386 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	MAGEA3	P43357	314 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	ARL4D	P49703	201 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	CSE1L	P55060	971 aa	Known RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	PPP1CA	P62136	330 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	CXADR	P78310	365 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	FOXM1	Q08050	763 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	PRKG2	Q13237	762 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	IL11RA	Q14626	422 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	DNAJC21	Q5F1R6	531 aa	Known RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	NEPRO	Q6NW34	567 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	CYB5D1	Q6P9G0	228 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	CCDC81	Q6ZN84	652 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	TMEM135	Q86UB9	458 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	HOOK3	Q86VS8	718 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	CARF	Q8N187	725 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	OR52E1	Q8NGJ3	308 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	GSDMB	Q8TAX9	411 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	KLHL6	Q8WZ60	621 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	ZNF669	Q96BR6	464 aa	Predicted RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	CRELD1	Q96HD1	420 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	FCRL3	Q96P31	734 aa	Predicted RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	CCNL2	Q96S94	520 aa	Predicted RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	HGH1	Q9BTY7	390 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	P2RY12	Q9H244	342 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	TRIT1	Q9H3H1	467 aa	Known RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	PRORY	Q9H606	182 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	SIDT1	Q9NXL6	827 aa	Known RBP	10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	POLG2	Q9UHN1	485 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	VPS9D1	Q9Y2B5	631 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	MAD1L1	Q9Y6D9	718 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	NBEA	Q8NFP9	2946 aa		10.78	□□□□□ -0.68
GGA1-222	ENST00000489772	GSAP	A4D1B5	854 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	TLCD2	A6NGC4	264 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772		H3BMM5	538 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	KPNA5	O15131	536 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	KDM1A	O60341	852 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	USP1	O94782	785 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	RPN2	P04844	631 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	POLR2C	P19387	275 aa	Predicted RBP	10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	OGN	P20774	298 aa	Known RBP	10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	AOAH	P28039	575 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	ACADL	P28330	430 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	CASQ1	P31415	396 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	ATP1A2	P50993	1020 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	ADAR	P55265	1226 aa	Known RBP	10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	EIF3B	P55884	814 aa	Known RBP	10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	HSD11B2	P80365	405 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	VAC14	Q08AM6	782 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	THOC5	Q13769	683 aa	Known RBP	10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	TGIF1	Q15583	401 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	TYSND1	Q2T9J0	566 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	MANEA	Q5SRI9	462 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	IZUMO3	Q5VZ72	239 aa		10.77	□□□□□ -0.68
GGA1-222	ENST00000489772	OTOA	Q7RTW8	1153 aa		10.77	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms