RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 STOML2Q9UJZ1 356 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 RPLP0P05388 317 aaKnown RBP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 GIMD1P0DJR0 217 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 CYP3A5P20815 502 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 TPTEP56180 551 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 SOWAHAQ2M3V2 549 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 UBAP2Q5T6F2 1119 aaKnown RBP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 CYP2U1Q7Z449 544 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 LMLNQ96KR4 655 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 TLL2Q9Y6L7 1015 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 PER2O15055 1255 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 MAGEB3O15480 346 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 MTRF1O75570 445 aaKnown RBP17.34■□□□□ 0.37
NPHP4-209ENST00000489180 RNF31Q96EP0 1072 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 C5orf34Q96MH7 638 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 TRIM3O75382 744 aaPredicted RBP17.34■□□□□ 0.37
NPHP4-209ENST00000489180 MATN4O95460 622 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 RPL17P18621 184 aaKnown RBP17.34■□□□□ 0.37
NPHP4-209ENST00000489180 HTR7P34969 479 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 GAD2Q05329 585 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 CRTC2Q53ET0 693 aaPredicted RBP17.34■□□□□ 0.37
NPHP4-209ENST00000489180 SLC30A6Q6NXT4 461 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 GALNT15Q8N3T1 639 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 PIGXQ8TBF5 258 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 CKLFQ9UBR5 152 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 DNAJB9Q9UBS3 223 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 PFDN2Q9UHV9 154 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 MRPS33Q9Y291 106 aaKnown RBP17.34■□□□□ 0.37
NPHP4-209ENST00000489180 PCDHA2Q9Y5H9 948 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 SOWAHBA6NEL2 793 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 FLT3LGP49771 235 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 IL10RBQ08334 325 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 SMCO1Q147U7 214 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 TAF1AQ15573 450 aaPredicted RBP17.34■□□□□ 0.37
NPHP4-209ENST00000489180 IFI44LQ53G44 452 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 SLC24A5Q71RS6 500 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 ZCCHC10Q8TBK6 192 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 MAGEH1Q9H213 219 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 PRAMEF33A0A0G2JMD5 474 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 EFCAB9A8MZ26 197 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 PRAMEF10O60809 474 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 ERN1O75460 977 aaKnown RBP17.34■□□□□ 0.37
NPHP4-209ENST00000489180 PRKCGP05129 697 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 AKT2P31751 481 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 MYBPC3Q14896 1274 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 NADK2Q4G0N4 442 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 IQCF2Q8IXL9 164 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 OR5K1Q8NHB7 308 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 GAL3ST1Q99999 423 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 PCDHGB3Q9Y5G1 929 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 SHPRHQ149N8 1683 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 A0A1B0GVM2 712 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 TCAF2A6NFQ2 919 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 PCP4L1A6NKN8 68 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 XKRYO14609 159 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 SLC7A4O43246 635 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 PRODHO43272 600 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 SMPD1P17405 629 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 GALNTL5Q7Z4T8 443 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 ARL14EPQ8N8R7 260 aaPredicted RBP17.34■□□□□ 0.37
NPHP4-209ENST00000489180 FETUBQ9UGM5 382 aa17.34■□□□□ 0.37
NPHP4-209ENST00000489180 MPZL2O60487 215 aa17.33■□□□□ 0.37
NPHP4-209ENST00000489180 DPYSL2Q16555 572 aa17.33■□□□□ 0.37
NPHP4-209ENST00000489180 NCBP2-AS2Q69YL0 99 aa17.33■□□□□ 0.37
NPHP4-209ENST00000489180 TMEM220Q6QAJ8 160 aa17.33■□□□□ 0.37
NPHP4-209ENST00000489180 LBX2Q6XYB7 198 aa17.33■□□□□ 0.37
NPHP4-209ENST00000489180 STX12Q86Y82 276 aa17.33■□□□□ 0.37
NPHP4-209ENST00000489180 SLC35B2Q8TB61 432 aa17.33■□□□□ 0.37
NPHP4-209ENST00000489180 PHPT1Q9NRX4 125 aaPredicted RBP17.33■□□□□ 0.37
NPHP4-209ENST00000489180 FAM234BA2RU67 622 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 RNASEH2AO75792 299 aaKnown RBP17.33■□□□□ 0.36
NPHP4-209ENST00000489180 EPHX1P07099 455 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 PRPS2P11908 318 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 PTGER3P43115 390 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 GPD2P43304 727 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 HERVK_113P63132 956 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 HNRNPDQ14103 355 aaKnown RBP17.33■□□□□ 0.36
NPHP4-209ENST00000489180 IDNKQ5T6J7 187 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 TNFAIP8L2Q6P589 184 aaPredicted RBP17.33■□□□□ 0.36
NPHP4-209ENST00000489180 CHST4Q8NCG5 386 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 OR10H4Q8NGA5 316 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 RAB2BQ8WUD1 216 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 CANT1Q8WVQ1 401 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 ERVK-6Q9BXR3 956 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 NUSAP1Q9BXS6 441 aaKnown RBP17.33■□□□□ 0.36
NPHP4-209ENST00000489180 OAZ3Q9UMX2 235 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 BCL9LQ86UU0 1499 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 SLC7A1P30825 629 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 CRY2Q49AN0 593 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 KIAA0930Q6ICG6 404 aaPredicted RBP17.33■□□□□ 0.36
NPHP4-209ENST00000489180 BEND7Q8N7W2 519 aaPredicted RBP17.33■□□□□ 0.36
NPHP4-209ENST00000489180 GLIS1Q8NBF1 620 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 OR51V1Q9H2C8 321 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 GIN1Q9NXP7 522 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 CNTN3Q9P232 1028 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 COMMD3Q9UBI1 195 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 MYOM1P52179 1685 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 ESR1P03372 595 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 TARDBPQ13148 414 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■■■■ 28.6
NPHP4-209ENST00000489180 OLIG2Q13516 323 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms