RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 DHX9Q08211 1270 aaKnown RBP18.64■□□□□ 0.57
SNX17-206ENST00000484886 C2orf54Q08AI8 447 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 PRKAA1Q13131 559 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 TMEM135Q86UB9 458 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 PDIK1LQ8N165 341 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 AGGF1Q8N302 714 aaeCLIP18.64■□□□□ 0.57
SNX17-206ENST00000484886 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.64■□□□□ 0.57
SNX17-206ENST00000484886 SPATA4Q8NEY3 305 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 ASZ1Q8WWH4 475 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 TAAR9Q96RI9 348 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 P2RY12Q9H244 342 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 TRIT1Q9H3H1 467 aaKnown RBP18.64■□□□□ 0.57
SNX17-206ENST00000484886 SRMSQ9H3Y6 488 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 VPS9D1Q9Y2B5 631 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 CRYL1Q9Y2S2 319 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 OR5K3A6NET4 321 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 SMAPO00193 183 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 NVLO15381 856 aaKnown RBP18.63■□□□□ 0.57
SNX17-206ENST00000484886 KIF1CO43896 1103 aaKnown RBP18.63■□□□□ 0.57
SNX17-206ENST00000484886 KRT37O76014 449 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 IVDP26440 423 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 ITPKBP27987 946 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 PPP1CAP62136 330 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 TYSND1Q2T9J0 566 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 DNTTIP2Q5QJE6 756 aaKnown RBP18.63■□□□□ 0.57
SNX17-206ENST00000484886 HP1BP3Q5SSJ5 553 aaPredicted RBP18.63■□□□□ 0.57
SNX17-206ENST00000484886 CILP2Q8IUL8 1156 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 OR5AR1Q8NGP9 310 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 CFAP61Q8NHU2 1237 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 SKA2Q8WVK7 121 aaPredicted RBP18.63■□□□□ 0.57
SNX17-206ENST00000484886 LPGAT1Q92604 370 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 ZNF592Q92610 1267 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 FOXJ2Q9P0K8 574 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 EPHA6Q9UF33 1036 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 TDRKHQ9Y2W6 561 aaKnown RBP18.63■□□□□ 0.57
SNX17-206ENST00000484886 DMXL2Q8TDJ6 3036 aa18.63■□□□□ 0.57
SNX17-206ENST00000484886 KMT2BQ9UMN6 2715 aaPredicted RBP18.62■□□□□ 0.57
SNX17-206ENST00000484886 ZCWPW2A0A1B0GU75 182 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 GSAPA4D1B5 854 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 B4E171 279 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 C9orf172C9J069 976 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 BHMG1C9JSJ3 638 aaPredicted RBP18.62■□□□□ 0.57
SNX17-206ENST00000484886 KPNA5O15131 536 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 TOX3O15405 576 aaPredicted RBP18.62■□□□□ 0.57
SNX17-206ENST00000484886 KLK10O43240 276 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 SEC31AO94979 1220 aaKnown RBP18.62■□□□□ 0.57
SNX17-206ENST00000484886 ANKRD34CP0C6C1 535 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 POLR2CP19387 275 aaPredicted RBP18.62■□□□□ 0.57
SNX17-206ENST00000484886 AOAHP28039 575 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 TSPAN7P41732 249 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 ARL4DP49703 201 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 ARL4CP56559 192 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 FOXM1Q08050 763 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 MSS51Q4VC12 460 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 CTSL3PQ5NE16 218 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 DCAF12Q5T6F0 453 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 BROXQ5VW32 411 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 HIBCHQ6NVY1 386 aaPredicted RBP18.62■□□□□ 0.57
SNX17-206ENST00000484886 OTOAQ7RTW8 1153 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 PRSS42Q7Z5A4 293 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 SPACA3Q8IXA5 215 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 OR52E1Q8NGJ3 308 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 CALML6Q8TD86 181 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 FAM136AQ96C01 138 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 TRIM44Q96DX7 344 aaPredicted RBP18.62■□□□□ 0.57
SNX17-206ENST00000484886 CFAP36Q96G28 342 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 EBNA1BP2Q99848 306 aaKnown RBP18.62■□□□□ 0.57
SNX17-206ENST00000484886 CTRCQ99895 268 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 FAM167BQ9BTA0 163 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 RAB33BQ9H082 229 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 CCDC68Q9H2F9 335 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 FBXO6Q9NRD1 293 aaPredicted RBP18.62■□□□□ 0.57
SNX17-206ENST00000484886 SNX24Q9Y343 169 aa18.62■□□□□ 0.57
SNX17-206ENST00000484886 PKD1L2Q7Z442 2459 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 E5RI56 91 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 H3BMM5 538 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 NDC80O14777 642 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 TTC4O95801 387 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 ESR1P03372 595 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 F7P08709 466 aaPredicted RBP18.61■□□□□ 0.57
SNX17-206ENST00000484886 CHRM3P20309 590 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 SLC1A2P43004 574 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 RPL21P46778 160 aaKnown RBP18.61■□□□□ 0.57
SNX17-206ENST00000484886 RAB15P59190 212 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 ABRQ12979 859 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 CTBP1Q13363 440 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 CRYMQ14894 314 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 HIF1AQ16665 826 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 COL28A1Q2UY09 1125 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 ANKS6Q68DC2 871 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 CENPUQ71F23 418 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 MAATS1Q7Z4T9 603 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 KCNMB4Q86W47 210 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 ZFAND4Q86XD8 727 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 VRK3Q8IV63 474 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 DENND6AQ8IWF6 608 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 SLC22A15Q8IZD6 547 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 GABPB2Q8TAK5 448 aaPredicted RBP18.61■□□□□ 0.57
SNX17-206ENST00000484886 PMEPA1Q969W9 287 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 PWWP2AQ96N64 755 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms