RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SIDT1Q9NXL6 827 aaKnown RBP17.53■□□□□ 0.4
HDAC6-225ENST00000483506 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.53■□□□□ 0.4
HDAC6-225ENST00000483506 SSUH2Q9Y2M2 353 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 ADAMTS20P59510 1910 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 IQCF5A8MTL0 148 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 C9orf172C9J069 976 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 H3BMM5 538 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 NDC80O14777 642 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 KPNA5O15131 536 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 RRP8O43159 456 aaKnown RBP17.52■□□□□ 0.4
HDAC6-225ENST00000483506 CD82P27701 267 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 ITGA8P53708 1063 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 EIF3BP55884 814 aaKnown RBP17.52■□□□□ 0.4
HDAC6-225ENST00000483506 RAB15P59190 212 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 CRYMQ14894 314 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 SNAP47Q5SQN1 464 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 ZNF470Q6ECI4 717 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 PTRHD1Q6GMV3 140 aaKnown RBP17.52■□□□□ 0.4
HDAC6-225ENST00000483506 OOSP2Q86WS3 158 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 TBC1D21Q8IYX1 336 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 PDIK1LQ8N165 341 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 CARFQ8N187 725 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDAC6-225ENST00000483506 JPH3Q8WXH2 748 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-225ENST00000483506 KLHL6Q8WZ60 621 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 USP7Q93009 1102 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 LRRC39Q96DD0 335 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 C16orf45Q96MC5 204 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-225ENST00000483506 TGM7Q96PF1 710 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 TAAR9Q96RI9 348 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 FERD3LQ96RJ6 166 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 DPH1Q9BZG8 443 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 OCIAD1Q9NX40 245 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 IL1RAPL1Q9NZN1 696 aa17.52■□□□□ 0.4
HDAC6-225ENST00000483506 PTPRQQ9UMZ3 2332 aa17.52■□□□□ 0.39
HDAC6-225ENST00000483506 UBA6A0AVT1 1052 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-225ENST00000483506 EFCAB7A8K855 629 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 A8MU76 341 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 EFCAB8A8MWE9 144 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-225ENST00000483506 MATN2O00339 956 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 PRAMEF10O60809 474 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 S1PR4O95977 384 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 APOA4P06727 396 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 RPL21P46778 160 aaKnown RBP17.51■□□□□ 0.39
HDAC6-225ENST00000483506 MAPK10P53779 464 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 PPP1CAP62136 330 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 MC2RQ01718 297 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 THOC5Q13769 683 aaKnown RBP17.51■□□□□ 0.39
HDAC6-225ENST00000483506 KRT33BQ14525 404 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 GBX1Q14549 363 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 BRD3Q15059 726 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 TMED2Q15363 201 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 IRGCQ6NXR0 463 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 NAPRTQ6XQN6 538 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 MAATS1Q7Z4T9 603 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 VRK3Q8IV63 474 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 KRT222Q8N1A0 295 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 OR52E1Q8NGJ3 308 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 OR5K2Q8NHB8 316 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 CALML6Q8TD86 181 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 WDR83Q9BRX9 315 aaKnown RBP17.51■□□□□ 0.39
HDAC6-225ENST00000483506 ERP44Q9BS26 406 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 TWSG1Q9GZX9 223 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 FBXO8Q9NRD0 319 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 LATS2Q9NRM7 1088 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 C20orf96Q9NUD7 363 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-225ENST00000483506 HRASLS2Q9NWW9 162 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 FOXJ2Q9P0K8 574 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 KLHL3Q9UH77 587 aa17.51■□□□□ 0.39
HDAC6-225ENST00000483506 CHD6Q8TD26 2715 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 RAD51CO43502 376 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 BANF1O75531 89 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 ITGB6P18564 788 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 C2orf54Q08AI8 447 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 HSPA14Q0VDF9 509 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 HIF1AQ16665 826 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 BBS9Q3SYG4 887 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 ZNF789Q5FWF6 425 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 SPANXN3Q5MJ09 141 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 PLEKHS1Q5SXH7 462 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 TMEM164Q5U3C3 297 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 STEAP4Q687X5 459 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 LRRC69Q6ZNQ3 347 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 IGDCC3Q8IVU1 814 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 DENND6AQ8IWF6 608 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 SPACA3Q8IXA5 215 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 BBOF1Q8ND07 529 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 PHC3Q8NDX5 983 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 OR5AR1Q8NGP9 310 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 KCNE4Q8WWG9 221 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 LCN9Q8WX39 176 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 UBXN4Q92575 508 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 DCBLD2Q96PD2 775 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 TEFMQ96QE5 360 aaKnown RBP17.5■□□□□ 0.39
HDAC6-225ENST00000483506 FAM167BQ9BTA0 163 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 ASPSCR1Q9BZE9 553 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 TRIT1Q9H3H1 467 aaKnown RBP17.5■□□□□ 0.39
HDAC6-225ENST00000483506 PLAC1Q9HBJ0 212 aa17.5■□□□□ 0.39
HDAC6-225ENST00000483506 POLG2Q9UHN1 485 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms