RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 LRRN3Q9H3W5 708 aa8.73□□□□□ -1.01
DDX56-211ENST00000479602 RHOJQ9H4E5 214 aa8.73□□□□□ -1.01
DDX56-211ENST00000479602 SUDS3Q9H7L9 328 aaPredicted RBP8.73□□□□□ -1.01
DDX56-211ENST00000479602 SAYSD1Q9NPB0 183 aa8.73□□□□□ -1.01
DDX56-211ENST00000479602 NINJ2Q9NZG7 142 aa8.73□□□□□ -1.01
DDX56-211ENST00000479602 ZFATQ9P243 1243 aa8.73□□□□□ -1.01
DDX56-211ENST00000479602 MARCH4Q9P2E8 410 aaPredicted RBP8.73□□□□□ -1.01
DDX56-211ENST00000479602 GNPTGQ9UJJ9 305 aa8.73□□□□□ -1.01
DDX56-211ENST00000479602 ATXN7L1Q9ULK2 861 aaPredicted RBP8.73□□□□□ -1.01
DDX56-211ENST00000479602 NFU1Q9UMS0 254 aa8.73□□□□□ -1.01
DDX56-211ENST00000479602 SUFUQ9UMX1 484 aa8.73□□□□□ -1.01
DDX56-211ENST00000479602 ST14Q9Y5Y6 855 aa8.73□□□□□ -1.01
DDX56-211ENST00000479602 USP9YO00507 2555 aaPredicted RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 USP9XQ93008 2570 aaPredicted RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 KIR2DS5A0A0G2JLQ3 304 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 A0A0G2JNG1 304 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 J3QKU1 62 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 KIR2DS3K7RE56 304 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 BUD23O43709 281 aaKnown RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 NUDT21O43809 227 aaKnown RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 UGT1A9O60656 530 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 SLCO2B1O94956 709 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 RHOXF2BP0C7M4 288 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 CBSLP0DN79 551 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 ENO3P13929 434 aaPredicted RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 ZNF8P17098 575 aaPredicted RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 UGT1A6P19224 532 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 UGT1A1P22309 533 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 UGT1A4P22310 534 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 UGT1A3P35503 534 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 CBSP35520 551 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 GP5P40197 560 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 VSNL1P62760 191 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 SPIDRQ14159 915 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 LY6DQ14210 128 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 SEMA3AQ14563 771 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 PTPRCAPQ14761 206 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 KIR2DS5Q14953 304 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 ZKSCAN8Q15776 578 aaPredicted RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 KLHL38Q2WGJ6 581 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 ZRANB3Q5FWF4 1079 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 PLEKHS1Q5SXH7 462 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 ZNF574Q6ZN55 896 aaPredicted RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 C3orf62Q6ZUJ4 267 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 RAB11FIP2Q7L804 512 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 LCA5Q86VQ0 697 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 AMZ2Q86W34 360 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 GKN2Q86XP6 184 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 HID1Q8IV36 788 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 PALM2Q8IXS6 379 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 FBXO15Q8NCQ5 510 aaPredicted RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 PDLIM5Q96HC4 596 aaKnown RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 CCNL2Q96S94 520 aaPredicted RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 GPR22Q99680 433 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 RHOXF2Q9BQY4 288 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 CCM2Q9BSQ5 444 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 TMEM109Q9BVC6 243 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 EPB41L4BQ9H329 900 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 EPB41L1Q9H4G0 881 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 CARS2Q9HA77 564 aaKnown RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 UGT1A7Q9HAW7 530 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 UGT1A10Q9HAW8 530 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 UGT1A8Q9HAW9 530 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 C20orf96Q9NUD7 363 aaPredicted RBP8.72□□□□□ -1.01
DDX56-211ENST00000479602 MED16Q9Y2X0 877 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 NOTCH2Q04721 2471 aa8.72□□□□□ -1.01
DDX56-211ENST00000479602 RP1L1Q8IWN7 2480 aaPredicted RBP8.71□□□□□ -1.01
DDX56-211ENST00000479602 A0A087WUV0 522 aaPredicted RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 UBA6A0AVT1 1052 aaPredicted RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 SLC5A10A0PJK1 596 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 CYSRT1A8MQ03 144 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 GPR39O43194 453 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 RIPK2O43353 540 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 NDUFS3O75489 264 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 WISP3O95389 354 aaPredicted RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 SLC4A1P02730 911 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 ITGB2P05107 769 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 RPLP0P05388 317 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 MYBL2P10244 700 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 F3P13726 295 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 PKMP14618 531 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 AOAHP28039 575 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 NDUFS1P28331 727 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 GABRB3P28472 473 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 AKT1P31749 480 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 CA5AP35218 305 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 MAGEA12P43365 314 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 SERPINB9P50453 376 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 CTSCP53634 463 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 LIMK2P53671 638 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 TERF1P54274 439 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 INHBCP55103 352 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 MRPS25P82663 173 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 BRD3Q15059 726 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 TGIF1Q15583 401 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 TAF1BQ53T94 588 aaPredicted RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 HSP90AA5PQ58FG0 334 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 CTSL3PQ5NE16 218 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 KIAA1614Q5VZ46 1190 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 CAPRIN2Q6IMN6 1127 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms