RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 HRASLS2Q9NWW9 162 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 SLC39A1Q9NY26 324 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 ITPR1Q14643 2758 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 ZFYVE26Q68DK2 2539 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 PIKFYVEQ9Y2I7 2098 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 TOX3O15405 576 aaPredicted RBP15.17■□□□□ 0.02
HMGA1-206ENST00000478214 KLK10O43240 276 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 F7P08709 466 aaPredicted RBP15.17■□□□□ 0.02
HMGA1-206ENST00000478214 OGNP20774 298 aaKnown RBP15.17■□□□□ 0.02
HMGA1-206ENST00000478214 RPS3P23396 243 aaKnown RBP eCLIP15.17■□□□□ 0.021e-11■■□□□ 12.1
HMGA1-206ENST00000478214 AOAHP28039 575 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 FMO4P31512 558 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 EIF3BP55884 814 aaKnown RBP15.17■□□□□ 0.02
HMGA1-206ENST00000478214 MC2RQ01718 297 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 DHX9Q08211 1270 aaKnown RBP15.17■□□□□ 0.02
HMGA1-206ENST00000478214 HSPA14Q0VDF9 509 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 MSS51Q4VC12 460 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 CTSL3PQ5NE16 218 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 TMEM164Q5U3C3 297 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 CACHD1Q5VU97 1274 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 ANKS6Q68DC2 871 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 CENPUQ71F23 418 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 PRSS42Q7Z5A4 293 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 LRRC6Q86X45 466 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 ZFAND4Q86XD8 727 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 VRK3Q8IV63 474 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 SPATA4Q8NEY3 305 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 OR52E1Q8NGJ3 308 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 OR5AR1Q8NGP9 310 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 LCN9Q8WX39 176 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 BIRC8Q96P09 236 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 TCF12Q99081 682 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 TSSK1BQ9BXA7 367 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 TRIM31Q9BZY9 425 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 GNPTGQ9UJJ9 305 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 ACSL6Q9UKU0 697 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 CDYLQ9Y232 598 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 PCDHGA3Q9Y5H0 932 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 B3GALT1Q9Y5Z6 326 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 CHD6Q8TD26 2715 aa15.17■□□□□ 0.02
HMGA1-206ENST00000478214 GPC4O75487 556 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 USP1O94782 785 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 POLR2CP19387 275 aaPredicted RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 CLN3Q13286 438 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 THOC5Q13769 683 aaKnown RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 MORF4L2Q15014 288 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 TGIF1Q15583 401 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 BBS9Q3SYG4 887 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 DNAJC21Q5F1R6 531 aaKnown RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 ZNF789Q5FWF6 425 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 DNTTIP2Q5QJE6 756 aaKnown RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 RNF187Q5TA31 235 aaPredicted RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 ZNF470Q6ECI4 717 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 HIBCHQ6NVY1 386 aaPredicted RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 OOSP2Q86WS3 158 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 CILP2Q8IUL8 1156 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 DENND6AQ8IWF6 608 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 SLC22A15Q8IZD6 547 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 UNC5BQ8IZJ1 945 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 ASZ1Q8WWH4 475 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 KLHL6Q8WZ60 621 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 PWWP2AQ96N64 755 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 PANX3Q96QZ0 392 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 MAP3K3Q99759 626 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 CTRCQ99895 268 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 DPH1Q9BZG8 443 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 B3GNT4Q9C0J1 378 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 ZNF768Q9H5H4 540 aaKnown RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 TFB2MQ9H5Q4 396 aaKnown RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 XKR8Q9H6D3 395 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 APMAPQ9HDC9 416 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 C20orf96Q9NUD7 363 aaPredicted RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 SIDT1Q9NXL6 827 aaKnown RBP15.16■□□□□ 0.02
HMGA1-206ENST00000478214 ASF1AQ9Y294 204 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 CRYL1Q9Y2S2 319 aa15.16■□□□□ 0.02
HMGA1-206ENST00000478214 IGHV5-51A0A0C4DH38 117 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 EFCAB8A8MWE9 144 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 PFDN6O15212 129 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 NIPSNAP2O75323 286 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 SEC31AO94979 1220 aaKnown RBP15.15■□□□□ 0.02
HMGA1-206ENST00000478214 S1PR4O95977 384 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 APOA4P06727 396 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 PGAM1P18669 254 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 ITGA8P53708 1063 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 RAB15P59190 212 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 SH3BP2P78314 561 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 C2orf54Q08AI8 447 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 CTBP1Q13363 440 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 LONRF1Q17RB8 773 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 DCAF12Q5T6F0 453 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 ARMC6Q6NXE6 501 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 IGDCC3Q8IVU1 814 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.15■□□□□ 0.023e-8■■■□□ 15.8
HMGA1-206ENST00000478214 FAM136AQ96C01 138 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 SNF8Q96H20 258 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 C16orf45Q96MC5 204 aaPredicted RBP15.15■□□□□ 0.02
HMGA1-206ENST00000478214 PPM1MQ96MI6 270 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 EBNA1BP2Q99848 306 aaKnown RBP15.15■□□□□ 0.02
HMGA1-206ENST00000478214 DDA1Q9BW61 102 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 ASPSCR1Q9BZE9 553 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms