RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 HLA-DQB2P05538 268 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF8P17098 575 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-214ENST00000477152 WT1P19544 449 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-214ENST00000477152 IL4RP24394 825 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 CDK18Q07002 472 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 ITGA9Q13797 1035 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 TRIM14Q14142 442 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 LDLRAP1Q5SW96 308 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 CACHD1Q5VU97 1274 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 TCTN3Q6NUS6 607 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF449Q6P9G9 518 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 ABRAXAS1Q6UWZ7 409 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 CARFQ8N187 725 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 FAM26EQ8N5C1 309 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 SIDT2Q8NBJ9 832 aaKnown RBP7.12□□□□□ -1.27
BRCA1-214ENST00000477152 BVESQ8NE79 360 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 OR8K5Q8NH50 307 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 ARRDC2Q8TBH0 407 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 DTX3LQ8TDB6 740 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 ZFPM2Q8WW38 1151 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 THAP4Q8WY91 577 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 NSMCE3Q96MG7 304 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 TGM7Q96PF1 710 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 RNF157Q96PX1 679 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 VPS35Q96QK1 796 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 OR6C1Q96RD1 312 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 AGAP2Q99490 1192 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 ASPNQ9BXN1 380 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 SPRY4Q9C004 299 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 SLC25A51Q9H1U9 297 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 EPN3Q9H201 632 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 HSD3B7Q9H2F3 369 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 FANCEQ9HB96 536 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF71Q9NQZ8 489 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-214ENST00000477152 WHRNQ9P202 907 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 EPHA6Q9UF33 1036 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 CGGBP1Q9UFW8 167 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-214ENST00000477152 LNPEPQ9UIQ6 1025 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 VPS4AQ9UN37 437 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 ASH1LQ9NR48 2969 aaKnown RBP7.12□□□□□ -1.27
BRCA1-214ENST00000477152 FLNBO75369 2602 aaKnown RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PRR19A6NJB7 356 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 FADS2P1A8MWK0 482 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 CHUKO15111 745 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PPM1BO75688 479 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF189O75820 626 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 KCNH1O95259 989 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PRAMEF1O95521 474 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 NDST3O95803 873 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 F13BP05160 661 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 FGF5P12034 268 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 GP1BBP13224 206 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PTMSP20962 102 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 KDELR1P24390 212 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 CAPZBP47756 277 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 NR2C2P49116 596 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 ARSEP51690 589 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 GYS2P54840 703 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 UBE2IP63279 158 aaKnown RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 RNF4P78317 190 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 TFDP2Q14188 446 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 SKIDA1Q1XH10 827 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 SFRP5Q5T4F7 317 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 ALS2CLQ60I27 953 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 IRGCQ6NXR0 463 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 CRTC3Q6UUV7 619 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 RFLNAQ6ZTI6 216 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 TRAPPC5Q8IUR0 188 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 RHOT2Q8IXI1 618 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF669Q96BR6 464 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 FAF2Q96CS3 445 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 TBC1D10AQ9BXI6 508 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 TWSG1Q9GZX9 223 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 SYTL2Q9HCH5 934 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 LRRC4CQ9HCJ2 640 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 CNOT6Q9ULM6 557 aaKnown RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 MAN2B2Q9Y2E5 1009 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PKP3Q9Y446 797 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF711Q9Y462 761 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PRKAB1Q9Y478 270 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PCDHGA6Q9Y5G7 932 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 HEY1Q9Y5J3 304 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 ST14Q9Y5Y6 855 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 OAS3Q9Y6K5 1087 aaKnown RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 LOC400499M0QZD8 3231 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 MGAQ8IWI9 3026 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 A0A087X0T9 212 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 A0A0A6YYK5 440 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PIPSLA2A3N6 862 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 LRRD1A4D1F6 860 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 A6NCN8 305 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 GOLGA6L3A6NEY3 463 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 MATN2O00339 956 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 AKR1B10O60218 316 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 CREG1O75629 220 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 KIAA0754O94854 1291 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PRLP01236 227 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 KLK3P07288 261 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 FAM228BP0C875 321 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 TYRP1P17643 537 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms