RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 CD180Q99467 661 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 MAP3K3Q99759 626 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 ZPBPQ9BS86 351 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 ASF1AQ9Y294 204 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 SAR1BQ9Y6B6 198 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 SDK2Q58EX2 2172 aa23.38■■□□□ 1.33
CPNE1-223ENST00000475146 SLC5A10A0PJK1 596 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 CTAGE9A4FU28 777 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 TLCD2A6NGC4 264 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 SDR42E2A6NKP2 422 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 IQCF5A8MTL0 148 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 GOLGA8KD6RF30 607 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 GOLGA8TH3BQL2 631 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 POLR2CP19387 275 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-223ENST00000475146 ARL4DP49703 201 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 ARMC3Q5W041 872 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 KIAA0930Q6ICG6 404 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-223ENST00000475146 MRNIPQ6NTE8 343 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 SDCCAG8Q86SQ7 713 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-223ENST00000475146 PPIL6Q8IXY8 311 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 KRT222Q8N1A0 295 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 OR52E1Q8NGJ3 308 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 ZNF669Q96BR6 464 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-223ENST00000475146 OR6C1Q96RD1 312 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 GNPTGQ9UJJ9 305 aa23.37■■□□□ 1.33
CPNE1-223ENST00000475146 IGHV5-51A0A0C4DH38 117 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 GSAPA4D1B5 854 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 K7ENP7 123 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 NELFEP18615 380 aaKnown RBP23.36■■□□□ 1.33
CPNE1-223ENST00000475146 CCR7P32248 378 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 EIF3BP55884 814 aaKnown RBP23.36■■□□□ 1.33
CPNE1-223ENST00000475146 HSPA14Q0VDF9 509 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 TMED2Q15363 201 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 INO80CQ6PI98 192 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-223ENST00000475146 IL22RA1Q8N6P7 574 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 NAT8LQ8N9F0 302 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 SIDT2Q8NBJ9 832 aaKnown RBP23.36■■□□□ 1.33
CPNE1-223ENST00000475146 OR5AR1Q8NGP9 310 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 ELMO2Q96JJ3 720 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 TRIM56Q9BRZ2 755 aaKnown RBP23.36■■□□□ 1.33
CPNE1-223ENST00000475146 CARD6Q9BX69 1037 aa23.36■■□□□ 1.33
CPNE1-223ENST00000475146 ZFYVE26Q68DK2 2539 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 TEX51A0A1B0GUA7 166 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 BHMG1C9JSJ3 638 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-223ENST00000475146 RAD1O60671 282 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 APOA4P06727 396 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 ACADLP28330 430 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 KPNA2P52292 529 aaKnown RBP23.35■■□□□ 1.33
CPNE1-223ENST00000475146 PTK6Q13882 451 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 DHX34Q14147 1143 aaKnown RBP23.35■■□□□ 1.33
CPNE1-223ENST00000475146 LRRC6Q86X45 466 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 CREG2Q8IUH2 290 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 KLHL7Q8IXQ5 586 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 CACNA2D3Q8IZS8 1091 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 NKD1Q969G9 470 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 SLC41A2Q96JW4 573 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 PANX3Q96QZ0 392 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 P2RY12Q9H244 342 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 TRIT1Q9H3H1 467 aaKnown RBP23.35■■□□□ 1.33
CPNE1-223ENST00000475146 TFB2MQ9H5Q4 396 aaKnown RBP23.35■■□□□ 1.33
CPNE1-223ENST00000475146 XKR8Q9H6D3 395 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 SEMA5BQ9P283 1151 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 PCYOX1Q9UHG3 505 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 MAD1L1Q9Y6D9 718 aa23.35■■□□□ 1.33
CPNE1-223ENST00000475146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.35■■□□□ 1.33
CPNE1-223ENST00000475146 CHD6Q8TD26 2715 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 FAM237BA0A1B0GVD1 139 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 MAGEB16A2A368 324 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 MATN2O00339 956 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 PFDN6O15212 129 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 STK17BO94768 372 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 RPS3P23396 243 aaKnown RBP eCLIP23.34■■□□□ 1.339e-21■□□□□ 9.4
CPNE1-223ENST00000475146 KCNAB1Q14722 419 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 ANKRD20A4Q4UJ75 823 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 RNF187Q5TA31 235 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-223ENST00000475146 RNASEH2BQ5TBB1 312 aaKnown RBP23.34■■□□□ 1.33
CPNE1-223ENST00000475146 CYB5D1Q6P9G0 228 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 AMIGO1Q86WK6 493 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 KMT5CQ86Y97 462 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 RASGRP3Q8IV61 690 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 ASZ1Q8WWH4 475 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 SLCO2A1Q92959 643 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 RNF31Q96EP0 1072 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 UBL7Q96S82 380 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-223ENST00000475146 NRTNQ99748 197 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 IL1RAPL1Q9NZN1 696 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 POMT2Q9UKY4 750 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 TDRKHQ9Y2W6 561 aaKnown RBP23.34■■□□□ 1.33
CPNE1-223ENST00000475146 RPS6KL1Q9Y6S9 549 aa23.34■■□□□ 1.33
CPNE1-223ENST00000475146 BTN3A1O00481 513 aa23.33■■□□□ 1.33
CPNE1-223ENST00000475146 DNALI1O14645 258 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-223ENST00000475146 EFSO43281 561 aa23.33■■□□□ 1.33
CPNE1-223ENST00000475146 OGNP20774 298 aaKnown RBP23.33■■□□□ 1.33
CPNE1-223ENST00000475146 CDH3P22223 829 aa23.33■■□□□ 1.33
CPNE1-223ENST00000475146 PAFAH1B1P43034 410 aa23.33■■□□□ 1.33
CPNE1-223ENST00000475146 MAGEA3P43357 314 aa23.33■■□□□ 1.33
CPNE1-223ENST00000475146 TUBB3Q13509 450 aa23.33■■□□□ 1.33
CPNE1-223ENST00000475146 IL11RAQ14626 422 aa23.33■■□□□ 1.33
CPNE1-223ENST00000475146 TYSND1Q2T9J0 566 aa23.33■■□□□ 1.33
CPNE1-223ENST00000475146 VRK3Q8IV63 474 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms