RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 RASGRP3Q8IV61 690 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 SLC35F6Q8N357 371 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 ESX1Q8N693 406 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 KIAA1143Q96AT1 154 aaPredicted RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 ELMO2Q96JJ3 720 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 KIFC1Q9BW19 673 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 AP1M1Q9BXS5 423 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 ULBP3Q9BZM4 244 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 GPN2Q9H9Y4 310 aaPredicted RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 PDE7BQ9NP56 450 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 TREX1Q9NSU2 369 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 CATSPERZQ9NTU4 200 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 AHCTF1Q8WYP5 2266 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 LOC101059948A0A1B0GTJ6 334 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 TCRBV7S3A2A0A539 114 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 PGRMC1O00264 195 aaKnown RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 MATN2O00339 956 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 BTN3A3O00478 584 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 KIF5CO60282 957 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 SPAG6O75602 509 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 ZBTB11O95625 1053 aaPredicted RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 DLGAP3O95886 979 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 ZNF28P17035 718 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 MGAT1P26572 445 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 ACADLP28330 430 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 NMBRP28336 390 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 COILP38432 576 aaPredicted RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 MAGEA6P43360 314 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 ARCN1P48444 511 aaKnown RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 TTPAP49638 278 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 VPS41P49754 854 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 KPNA2P52292 529 aaKnown RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 CYP4F2P78329 520 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 ACY1Q03154 408 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 C19orf57Q0VDD7 668 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 PRKG2Q13237 762 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 TUBB3Q13509 450 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 KCNAB1Q14722 419 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 CYP1B1Q16678 543 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 SYTL3Q4VX76 610 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 CCDC137Q6PK04 289 aaKnown RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 C6orf15Q6UXA7 325 aaPredicted RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 NAPRTQ6XQN6 538 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 LDB1Q86U70 411 aaPredicted RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 AMIGO1Q86WK6 493 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 PPP1R3BQ86XI6 285 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 UNC5BQ8IZJ1 945 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 D2HGDHQ8N465 521 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 OR52E1Q8NGJ3 308 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 OR5AR1Q8NGP9 310 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 ACTRT1Q8TDG2 376 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 COG1Q8WTW3 980 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 SLC45A3Q96JT2 553 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 FCRL4Q96PJ5 515 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 OSBPL9Q96SU4 736 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 EFHD1Q9BUP0 239 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 CARD6Q9BX69 1037 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 TSSK1BQ9BXA7 367 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 SLC12A9Q9BXP2 914 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 KCNF1Q9H3M0 494 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 FGF21Q9NSA1 209 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 TRMT1Q9NXH9 659 aaKnown RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 MARCH4Q9P2E8 410 aaPredicted RBP10.87□□□□□ -0.67
CKS1B-206ENST00000474215 POLG2Q9UHN1 485 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 POMT2Q9UKY4 750 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 RARRES3Q9UL19 164 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 ASF1AQ9Y294 204 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 SDK2Q58EX2 2172 aa10.87□□□□□ -0.67
CKS1B-206ENST00000474215 GSAPA4D1B5 854 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 SLC9B1P1A6NJY1 282 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 AVILO75366 819 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 C1QL1O75973 258 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 KIAA0754O94854 1291 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 VAPBO95292 243 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 CCNYL3P0C7X3 344 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 EBLN1P0CF75 366 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 CDH3P22223 829 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 PRDX3P30048 256 aaKnown RBP10.86□□□□□ -0.67
CKS1B-206ENST00000474215 CCR7P32248 378 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 STAT5AP42229 794 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 TERF1P54274 439 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 COL9A2Q14055 689 aaPredicted RBP10.86□□□□□ -0.67
CKS1B-206ENST00000474215 LY6DQ14210 128 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 KCNJ11Q14654 390 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 TBR1Q16650 682 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 LINC00303Q3SY05 128 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 TMTC4Q5T4D3 741 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 ARMC3Q5W041 872 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 PWWP2BQ6NUJ5 590 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 FBXO38Q6PIJ6 1188 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 TBC1D21Q8IYX1 336 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 MPP5Q8N3R9 675 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 GALNT6Q8NCL4 622 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 ASZ1Q8WWH4 475 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 ANP32BQ92688 251 aaKnown RBP10.86□□□□□ -0.67
CKS1B-206ENST00000474215 EXTL1Q92935 676 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 PPM1MQ96MI6 270 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 NRTNQ99748 197 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 HGH1Q9BTY7 390 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms