RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 LINC00303Q3SY05 128 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ODF2Q5BJF6 829 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 RAB41Q5JT25 222 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 FHL5Q5TD97 284 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 KIAA1614Q5VZ46 1190 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 PMS2CLQ68D20 193 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 KRT80Q6KB66 452 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 LRIG3Q6UXM1 1119 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 MTSS1LQ765P7 747 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 GET4Q7L5D6 327 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 BCDIN3DQ7Z5W3 292 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 DNAJB7Q7Z6W7 309 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 TMPRSS12Q86WS5 348 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ERICH1Q86X53 443 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ARID3BQ8IVW6 561 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 NAXDQ8IW45 347 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 TMEM217Q8N7C4 229 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 SYT2Q8N9I0 419 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 PNLDC1Q8NA58 520 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 POGLUT1Q8NBL1 392 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ZNF248Q8NDW4 579 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 PIGOQ8TEQ8 1089 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 FAR1Q8WVX9 515 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 PRPF31Q8WWY3 499 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 PSPC1Q8WXF1 523 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 LINC00476Q8WZB0 136 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 SGCDQ92629 289 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 VPS33AQ96AX1 596 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ZBTB9Q96C00 473 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 SIPA1Q96FS4 1042 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 PERPQ96FX8 193 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 PGAM5Q96HS1 289 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 TMEM68Q96MH6 324 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 GCNAQ96QF7 691 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 NUDCD1Q96RS6 583 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 LGMNQ99538 433 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 MACROD1Q9BQ69 325 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 CLSTN3Q9BQT9 956 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ADPGKQ9BRR6 497 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 DUSP26Q9BV47 211 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 OR10A4Q9H209 315 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 CWH43Q9H720 699 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 VCPKMTQ9H867 229 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 POLR1BQ9H9Y6 1135 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 RANGRFQ9HD47 186 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.36□□□□□ -2.03
CALD1-216ENST00000473714 ASAH2Q9NR71 780 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 SLC6A13Q9NSD5 602 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ARGLU1Q9NWB6 273 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 SUCLA2Q9P2R7 463 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 NLKQ9UBE8 527 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 HSPB7Q9UBY9 170 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 GIMAP2Q9UG22 337 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ICKQ9UPZ9 632 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 CARD8Q9Y2G2 431 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 PTRH2Q9Y3E5 179 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 RAP2CQ9Y3L5 183 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 KNSTRNQ9Y448 316 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 WNT6Q9Y6F9 365 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 CAPN7Q9Y6W3 813 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 FLT1P17948 1338 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 RYR3Q15413 4870 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 LOC100509620A0A075B734 347 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 CYP2D7A0A087X1C5 515 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 A0A096LPK6 155 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ARHGEF37A1IGU5 675 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 WDR27A2RRH5 827 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 POC1B-GALNT4F8VUJ3 575 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 INPPL1O15357 1258 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 SEC14L5O43304 696 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 TPPPO94811 219 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 TMCC1O94876 653 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 SLU7O95391 586 aaKnown RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 CLDN1O95832 211 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 MT-CYBP00156 380 aaPredicted RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 MBPP02686 304 aaPredicted RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 TFP02787 698 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 SRPRAP08240 638 aaKnown RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 PRR35P0CG20 571 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 RNF224P0DH78 156 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 NR2F1P10589 423 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 GHRP10912 638 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 SCG2P13521 617 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ZNF182P17025 639 aaPredicted RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 GJA1P17302 382 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 PTPN2P17706 415 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 SFPQP23246 707 aaKnown RBP eCLIP2.35□□□□□ -2.03
CALD1-216ENST00000473714 SHMT1P34896 483 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 PTGER1P34995 402 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ATP6V1E1P36543 226 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 GARSP41250 739 aaKnown RBP2.35□□□□□ -2.03
CALD1-216ENST00000473714 ZNF84P51523 738 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 CLCN4P51793 760 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 CLCNKBP51801 687 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ROR1Q01973 937 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ACSM2AQ08AH3 577 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 PMPCAQ10713 525 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 OLIG2Q13516 323 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 KRT33BQ14525 404 aa2.35□□□□□ -2.03
CALD1-216ENST00000473714 ASIC2Q16515 512 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms