RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 RNF149Q8NC42 400 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 IL17RDQ8NFM7 739 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 HASPINQ8TF76 798 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 FAR1Q8WVX9 515 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 SDCCAG3Q96C92 435 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 ZNF300Q96RE9 604 aaPredicted RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 SLC30A3Q99726 388 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 TRMOQ9BU70 441 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 BTBD2Q9BX70 525 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 FAM126AQ9BYI3 521 aaPredicted RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 SLIRPQ9GZT3 109 aaKnown RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 HAPLN2Q9GZV7 340 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 CXCL16Q9H2A7 254 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 NXF3Q9H4D5 531 aaKnown RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 CAB39LQ9H9S4 337 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 CMTM6Q9NX76 183 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 MAP10Q9P2G4 905 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 FBXO5Q9UKT4 447 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 SLC39A10Q9ULF5 831 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 NDRG2Q9UN36 371 aaKnown RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 PCDHA9Q9Y5H5 950 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 PMF1-BGLAPU3KQ54 211 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 TDRD15B5MCY1 1934 aaKnown RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 ZFHX4Q86UP3 3567 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 ZCWPW2A0A1B0GU75 182 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 A0A1W2PQ67 120 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 PABPN1LA6NDY0 278 aaKnown RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 AGAP5A6NIR3 686 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 ZSCAN5BA6NJL1 495 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 ERI2A8K979 691 aaKnown RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 PDZK1P1A8MUH7 402 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 K7ERI5 159 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 HAT1O14929 419 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 XYLBO75191 536 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 ECI2O75521 394 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 INMTO95050 263 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 MFN2O95140 757 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 MATN4O95460 622 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 ALPLP05186 524 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 RETP07949 1114 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 HDCP19113 662 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 HTR1EP28566 365 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 HOXC13P31276 330 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 RYKP34925 604 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 CLCNKBP51801 687 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 PPP2R2BQ00005 443 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 GALK2Q01415 458 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 GBE1Q04446 702 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 PRKCDQ05655 676 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 IFRD2Q12894 506 aaPredicted RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 USP10Q14694 798 aaKnown RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 POU6F1Q14863 301 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 AMHR2Q16671 573 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 GEN1Q17RS7 908 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 CDONQ4KMG0 1287 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 ATAD3CQ5T2N8 411 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 SYT6Q5T7P8 510 aaPredicted RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 FAM171A1Q5VUB5 890 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 STEAP3Q658P3 488 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 OR6B2Q6IFH4 312 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 NEK5Q6P3R8 708 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 SCYL2Q6P3W7 929 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 CNSTQ6PJW8 725 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 MAMSTRQ6ZN01 415 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 STRADAQ7RTN6 431 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 KCNMB4Q86W47 210 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 PLD3Q8IV08 490 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 GALNT12Q8IXK2 581 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 RIMKLAQ8IXN7 391 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 MCFD2Q8NI22 146 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 NDNFQ8TB73 568 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 FIG4Q92562 907 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 MARVELD3Q96A59 401 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 KCTD14Q9BQ13 255 aaPredicted RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 CHRDQ9H2X0 955 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 SOX17Q9H6I2 414 aaPredicted RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 LMAN1LQ9HAT1 526 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 CHRAC1Q9NRG0 131 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 DDX28Q9NUL7 540 aaKnown RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 FAM118AQ9NWS6 357 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 RCOR3Q9P2K3 495 aaPredicted RBP9.93□□□□□ -0.82
APTX-216ENST00000472896 XPR1Q9UBH6 696 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 EGFL7Q9UHF1 273 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 RAB23Q9ULC3 237 aa9.93□□□□□ -0.82
APTX-216ENST00000472896 F5P12259 2224 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 A0A0J9YYE9 177 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 CLDN24A6NM45 220 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 SHOXO15266 292 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 ZW10O43264 779 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 ARF4P18085 180 aaPredicted RBP9.92□□□□□ -0.82
APTX-216ENST00000472896 POLR2CP19387 275 aaPredicted RBP9.92□□□□□ -0.82
APTX-216ENST00000472896 SLC6A2P23975 617 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 HOXA9P31269 272 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 SDC4P31431 198 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 RAP1GAPP47736 663 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 SNX16P57768 344 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 RAD51Q06609 339 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 GAS6Q14393 721 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 GRM3Q14832 879 aa9.92□□□□□ -0.82
APTX-216ENST00000472896 CSRP2Q16527 193 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms