RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 LMF2Q9BU23 707 aaKnown RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 CPSF3Q9UKF6 684 aaKnown RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 POU2F3Q9UKI9 436 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 POMT1Q9Y6A1 747 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 TOPBP1Q92547 1522 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 A0A1W2PPQ1 181 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 MAGEA13PA6NCF6 341 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 TMEM221A6NGB7 291 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 SRRM3A6NNA2 597 aaPredicted RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 HNRNPCL2B2RXH8 293 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 CLDN4O14493 209 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 TFAP2AP05549 437 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 H1F0P07305 194 aaKnown RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 KRT19P08727 400 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 ITGA2P17301 1181 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 CDC25CP30307 473 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 TLX1P31314 330 aaPredicted RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 CCKBRP32239 447 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 IL15P40933 162 aaPredicted RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 CDKN2AP42771 156 aaKnown RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 PRKCZQ05513 592 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 SCN1BQ07699 218 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 ASPRV1Q53RT3 343 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 C6orf136Q5SQH8 315 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 IRAK1BP1Q5VVH5 260 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 RAD9BQ6WBX8 426 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 C11orf57Q6ZUT1 292 aaPredicted RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 CREB3L2Q70SY1 520 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 SATL1Q86VE3 508 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 PTOV1Q86YD1 416 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 OR5M8Q8NGP6 311 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 NEUROG1Q92886 237 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 DAZLQ92904 295 aaKnown RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 EXT2Q93063 718 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 BICD1Q96G01 975 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 OXNAD1Q96HP4 312 aaPredicted RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 RMDN2Q96LZ7 410 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 FEVQ99581 238 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 BTBD10Q9BSF8 475 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 TM6SF1Q9BZW5 370 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 RSPH9Q9H1X1 276 aaPredicted RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 GAREM1Q9H706 876 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 XAB2Q9HCS7 855 aaKnown RBP3.88□□□□□ -1.79
PRPF3-204ENST00000470824 ABCF3Q9NUQ8 709 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 OSER1Q9NX31 292 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 MALT1Q9UDY8 824 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 DLGAP4Q9Y2H0 992 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 PADI2Q9Y2J8 665 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 WDR97A6NE52 1622 aa3.88□□□□□ -1.79
PRPF3-204ENST00000470824 CLASP1Q7Z460 1538 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 A0A087WV48 116 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 FEZF1A0PJY2 475 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 OR6C76A6NM76 312 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 PRR32B1ATL7 298 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 PTGESO14684 152 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 OR10H2O60403 315 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 GCNT3O95395 438 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 HLA-DOBP13765 273 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 CSF2RAP15509 400 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 PDGFRAP16234 1089 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 PSMA3P25788 255 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 ATP5DP30049 168 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 AHRP35869 848 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 TPD52P55327 224 aaPredicted RBP3.87□□□□□ -1.79
PRPF3-204ENST00000470824 LINC00205P59089 165 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 MZT1Q08AG7 82 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 PNRC1Q12796 327 aaPredicted RBP3.87□□□□□ -1.79
PRPF3-204ENST00000470824 SNTA1Q13424 505 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 SLC39A14Q15043 492 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 MDH1BQ5I0G3 518 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 GRTP1Q5TC63 336 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 NDUFAF5Q5TEU4 345 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 SFMBT2Q5VUG0 894 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 PRR27Q6MZM9 219 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 MFSD12Q6NUT3 480 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 PACS1Q6VY07 963 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 MFSD6Q6ZSS7 791 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 MSANTD1Q6ZTZ1 278 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 SPATA21Q7Z572 469 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 SPATA19Q7Z5L4 167 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 COMMD2Q86X83 199 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 ZNF611Q8N823 705 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 L3MBTL4Q8NA19 623 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 LILRB1Q8NHL6 650 aaPredicted RBP3.87□□□□□ -1.79
PRPF3-204ENST00000470824 KCNE4Q8WWG9 221 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 VOPP1Q96AW1 172 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 ABHD8Q96I13 439 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 CCDC114Q96M63 670 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 FKRPQ9H9S5 495 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 TRPC7Q9HCX4 862 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 CHCHD3Q9NX63 227 aaKnown RBP3.87□□□□□ -1.79
PRPF3-204ENST00000470824 TBC1D7Q9P0N9 293 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 ABT1Q9ULW3 272 aaKnown RBP3.87□□□□□ -1.79
PRPF3-204ENST00000470824 SPIN1Q9Y657 262 aaPredicted RBP3.87□□□□□ -1.79
PRPF3-204ENST00000470824 ZFP37Q9Y6Q3 630 aaPredicted RBP3.87□□□□□ -1.79
PRPF3-204ENST00000470824 SYNJ1O43426 1573 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 CGNL1Q0VF96 1302 aa3.87□□□□□ -1.79
PRPF3-204ENST00000470824 A0A0G2JNG1 304 aa3.86□□□□□ -1.79
PRPF3-204ENST00000470824 HYKKA2RU49 373 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms