RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 HOXB6P17509 224 aaKnown RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 NFKBIAP25963 317 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 RGS4P49798 205 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GABARAPL2P60520 117 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 RPL38P63173 70 aaKnown RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 PTGR1Q14914 329 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 MOGQ16653 247 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 ENPP6Q6UWR7 440 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 LINGO4Q6UY18 593 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GPR149Q86SP6 731 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 SERPINA9Q86WD7 417 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 TMEM173Q86WV6 379 aaPredicted RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 CALHM3Q86XJ0 350 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 C8orf59Q8N0T1 100 aaPredicted RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 RBFAQ8N0V3 343 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 CLEC4FQ8N1N0 589 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 SLC43A3Q8NBI5 491 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 OR10A6Q8NH74 314 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 DNAJB8Q8NHS0 232 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 SNX19Q92543 992 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 POP5Q969H6 163 aaKnown RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 WBP2Q969T9 261 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 RHBDF1Q96CC6 855 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 SH3GL1Q99961 368 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 AMBRA1Q9C0C7 1298 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 NACA2Q9H009 215 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 CLPBQ9H078 707 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 MAGIXQ9H6Y5 334 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 RRAGCQ9HB90 399 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 FANCEQ9HB96 536 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GKN1Q9NS71 199 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 HCSTQ9UBK5 93 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GNPTGQ9UJJ9 305 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 NAALAD2Q9Y3Q0 740 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 PCDHB9Q9Y5E1 797 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 ELOVL7A1L3X0 281 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GMNNO75496 209 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 PGLSO95336 258 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 EBLN1P0CF75 366 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 PCNAP12004 261 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 CCNA2P20248 432 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 DGKAP23743 735 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 TUFMP49411 452 aaKnown RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GATMP50440 423 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GZMMP51124 257 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 MAPKAPK3Q16644 382 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 CDKN3Q16667 212 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 FAM174BQ3ZCQ3 159 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GPRC6AQ5T6X5 926 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 ATG9BQ674R7 924 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 PTRHD1Q6GMV3 140 aaKnown RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 PRSS55Q6UWB4 352 aaPredicted RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 C16orf59Q7L2K0 433 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 RNF180Q86T96 592 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 SAPCD2Q86UD0 394 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 CRIPAKQ8N1N5 446 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 CHDHQ8NE62 594 aaPredicted RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 MAGED4Q96JG8 741 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GPR63Q9BZJ6 419 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 PALMDQ9NP74 551 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 ADGRE2Q9UHX3 823 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 FNDC3AQ9Y2H6 1198 aaKnown RBP13.39□□□□□ -0.27
BRCA1-209ENST00000470026 PCDHGA8Q9Y5G5 932 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 PRSS21Q9Y6M0 314 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 FAM220BPB1ANY3 271 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 GFRA2O00451 464 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 MAGEB3O15480 346 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 PRAMEF1O95521 474 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 PGRP06401 933 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 HTR1AP08908 422 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 HOXB9P17482 250 aaPredicted RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 MZF1P28698 734 aaPredicted RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 ARL1P40616 181 aaPredicted RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 GNPDA1P46926 289 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 AP1S1P61966 158 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 TMED1Q13445 227 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 GPNMBQ14956 572 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 PHKG1Q16816 387 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 PLA2G4EQ3MJ16 856 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 ANKDD1AQ495B1 522 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 USP39Q53GS9 565 aaKnown RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 SPANXN4Q5MJ08 99 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 C6orf141Q5SZD1 244 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 LRIF1Q5T3J3 769 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 LAIR2Q6ISS4 152 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 MACC1Q6ZN28 852 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 R3HCC1LQ7Z5L2 792 aaKnown RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 MICU2Q8IYU8 434 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 SPARTQ8N0X7 666 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 RAB2BQ8WUD1 216 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 FBLIM1Q8WUP2 373 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 BCL7CQ8WUZ0 217 aaPredicted RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 FIG4Q92562 907 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 ALG14Q96F25 216 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 SLC47A1Q96FL8 570 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 MYO19Q96H55 970 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 RBM4BQ9BQ04 359 aaKnown RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 RBM4Q9BWF3 364 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms