RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PRSS16Q9NQE7 514 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 DYRK4Q9NR20 520 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 EIF2B3Q9NR50 452 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SLC2A4RGQ9NR83 387 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 CHRAC1Q9NRG0 131 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 VPS45Q9NRW7 570 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ING3Q9NXR8 418 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 NINJ2Q9NZG7 142 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 PPP4R1LQ9P1A2 415 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 MUTYHQ9UIF7 546 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 DUSP12Q9UNI6 340 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SORCS3Q9UPU3 1222 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SHOC2Q9UQ13 582 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 HS3ST2Q9Y278 367 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 MTF2Q9Y483 593 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 RANBP2P49792 3224 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 DOCK8Q8NF50 2099 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 CHD7Q9P2D1 2997 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 KIF26AQ9ULI4 1882 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 MYO10Q9HD67 2058 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 TCF20Q9UGU0 1960 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 LOC285095A0A1B0GVY8 99 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 A0A1W2PRX2 142 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 KANSL1LA0AUZ9 987 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 MAGEB16A2A368 324 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 CCDC151A5D8V7 595 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 NPEPPSL1A6NEC2 478 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 PRR23AA6NEV1 266 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 SMIM23A6NLE4 172 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 C16orf96A6NNT2 1141 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 ERI2A8K979 691 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 ANKRD66B4E2M5 251 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 B8ZZF3 427 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 GOLGA8KD6RF30 607 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 C1QTNF3-AMACRE9PGA6 284 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 POC1B-GALNT4F8VUJ3 575 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 GOLGA8TH3BQL2 631 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 AP3B1O00203 1094 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 CCL22O00626 93 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 PRRG2O14669 202 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 MID1O15344 667 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 TP73O15350 636 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 EIF3HO15372 352 aaKnown RBP eCLIP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 STX7O15400 261 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 PPFIA2O75334 1257 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 PIAS1O75925 651 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 SUN1O94901 812 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 PGLSO95336 258 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 CLDN7O95471 211 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 CTSLP07711 333 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 F7P08709 466 aaPredicted RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 ATXN1LP0C7T5 689 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 MLNP12872 115 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 HOXB2P14652 356 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 GLULP15104 373 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 GYPEP15421 78 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 H2AFXP16104 143 aaPredicted RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 HLA-DPA1P20036 260 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 ADRA1DP25100 572 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 NMBRP28336 390 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 HNF1BP35680 557 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 HSD17B3P37058 310 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 RPS19P39019 145 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 MAGEA6P43360 314 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 CSNK1DP48730 415 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 METAP1P53582 386 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 SLC16A1P53985 500 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 MRPS21P82921 87 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 CDK16Q00536 496 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 IFFO1Q0D2I5 559 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 MGAT2Q10469 447 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 DUSP8Q13202 625 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 RIN1Q13671 783 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 SLC29A2Q14542 456 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 STARD3Q14849 445 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 ODF1Q14990 250 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 E2F5Q15329 346 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 UAP1Q16222 522 aaPredicted RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 PCID2Q5JVF3 399 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 EOGTQ5NDL2 527 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 EMBQ6PCB8 327 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 KIAA1324Q6UXG2 1013 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 RANBP10Q6VN20 620 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 Q6ZS52 159 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 GLT6D1Q7Z4J2 308 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 ADGRE4PQ86SQ3 457 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 TAX1BP1Q86VP1 789 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 SUGP1Q8IWZ8 645 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 CTAGE3PQ8IX95 158 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 GPR135Q8IZ08 494 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 HDDC3Q8N4P3 179 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 OTUD6BQ8N6M0 293 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 IL17RCQ8NAC3 791 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 GPR156Q8NFN8 814 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 MDGA1Q8NFP4 955 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 ZNF480Q8WV37 535 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 PIH1D2Q8WWB5 315 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 ATXN2LQ8WWM7 1075 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 CAVIN3Q969G5 261 aa4.06□□□□□ -1.76
TMEM39A-204ENST00000468545 ARRDC3Q96B67 414 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms