RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SLC45A3Q96JT2 553 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 HGH1Q9BTY7 390 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 XKR8Q9H6D3 395 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 TREX1Q9NSU2 369 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 POMT2Q9UKY4 750 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 TTC7AQ9ULT0 858 aaPredicted RBP21.17■□□□□ 0.98
LIME1-203ENST00000465591 SLC5A10A0PJK1 596 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 BHMG1C9JSJ3 638 aaPredicted RBP21.16■□□□□ 0.98
LIME1-203ENST00000465591 BTN3A1O00481 513 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 LIN7AO14910 233 aaPredicted RBP21.16■□□□□ 0.98
LIME1-203ENST00000465591 NKX2-8O15522 239 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 NRDCO43847 1150 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 GSTM1P09488 218 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 ITGB6P18564 788 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 ACADLP28330 430 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 NMBRP28336 390 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 TERF1P54274 439 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 PRAMEP78395 509 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 GSTM4Q03013 218 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 MAP7Q14244 749 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.16■□□□□ 0.98
LIME1-203ENST00000465591 PWWP2BQ6NUJ5 590 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 NLRP9Q7RTR0 991 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 PPP1R3BQ86XI6 285 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 RASGEF1CQ8N431 466 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 D2HGDHQ8N465 521 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 ESX1Q8N693 406 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 OR5AR1Q8NGP9 310 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 PEX13Q92968 403 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.16■□□□□ 0.98
LIME1-203ENST00000465591 SGSM3Q96HU1 749 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 TRIT1Q9H3H1 467 aaKnown RBP21.16■□□□□ 0.98
LIME1-203ENST00000465591 KCNF1Q9H3M0 494 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 SRMSQ9H3Y6 488 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 MVB12BQ9H7P6 319 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 LNPEPQ9UIQ6 1025 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 MRPS18BQ9Y676 258 aaKnown RBP21.16■□□□□ 0.98
LIME1-203ENST00000465591 RPS6KL1Q9Y6S9 549 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 SEC16AO15027 2179 aa21.16■□□□□ 0.98
LIME1-203ENST00000465591 FTH1P02794 183 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 FAM87AP0C7U9 286 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 TPBGLP0DKB5 382 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 MGAT1P26572 445 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 VPS41P49754 854 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 GPR19Q15760 415 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 FASTKD1Q53R41 847 aaKnown RBP21.15■□□□□ 0.98
LIME1-203ENST00000465591 LYPLAL1Q5VWZ2 237 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 ARMC6Q6NXE6 501 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 C6orf15Q6UXA7 325 aaPredicted RBP21.15■□□□□ 0.98
LIME1-203ENST00000465591 C4orf22Q6V702 233 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 KMT5CQ86Y97 462 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 AP1M1Q9BXS5 423 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 TFB2MQ9H5Q4 396 aaKnown RBP21.15■□□□□ 0.98
LIME1-203ENST00000465591 FGF21Q9NSA1 209 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 SYBUQ9NX95 663 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 RARRES3Q9UL19 164 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 ICKQ9UPZ9 632 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 JRKLQ9Y4A0 524 aa21.15■□□□□ 0.98
LIME1-203ENST00000465591 SLC9B1P1A6NJY1 282 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 ZNF891A8MT65 544 aaPredicted RBP21.14■□□□□ 0.97
LIME1-203ENST00000465591 IQCF5A8MTL0 148 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 QSOX1O00391 747 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 TERTO14746 1132 aaKnown RBP21.14■□□□□ 0.97
LIME1-203ENST00000465591 ZBTB11O95625 1053 aaPredicted RBP21.14■□□□□ 0.97
LIME1-203ENST00000465591 OR56A5P0C7T3 313 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 TPSB2P20231 275 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 ARNTP27540 789 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 CCR7P32248 378 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 CSE1LP55060 971 aaKnown RBP21.14■□□□□ 0.97
LIME1-203ENST00000465591 HSD11B2P80365 405 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 TPSAB1Q15661 275 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 ATP1A1-AS1Q5TC04 95 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 CES3Q6UWW8 571 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 VRK3Q8IV63 474 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 ADGRF3Q8IZF5 1079 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 KIAA1143Q96AT1 154 aaPredicted RBP21.14■□□□□ 0.97
LIME1-203ENST00000465591 IL22Q9GZX6 179 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 AKIRIN1Q9H9L7 192 aaPredicted RBP21.14■□□□□ 0.97
LIME1-203ENST00000465591 PDE7BQ9NP56 450 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 HOMER3Q9NSC5 361 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 CATSPERZQ9NTU4 200 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 CROTQ9UKG9 612 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 BTRCQ9Y297 605 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 BOD1L1Q8NFC6 3051 aa21.14■□□□□ 0.97
LIME1-203ENST00000465591 GSAPA4D1B5 854 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 PRKAR1AP10644 381 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 PRDX3P30048 256 aaKnown RBP21.13■□□□□ 0.97
LIME1-203ENST00000465591 NPY2RP49146 381 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 ARL4DP49703 201 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 ACY1Q03154 408 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 PRKAA1Q13131 559 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 KCNJ11Q14654 390 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 ANKRD22Q5VYY1 191 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 LRRC8BQ6P9F7 803 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 ZNF449Q6P9G9 518 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 AMIGO1Q86WK6 493 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 KRT222Q8N1A0 295 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 SLC35F6Q8N357 371 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 COG1Q8WTW3 980 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 STARD8Q92502 1023 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms