RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	SEC14L5	O43304	696 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ITM2A	O43736	263 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MTRF1	O75570	445 aa	Known RBP	5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TF	P02787	698 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PCNA	P12004	261 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CAPN3	P20807	821 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NFKBIA	P25963	317 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ADSS	P30520	456 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	DCTD	P32321	178 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RDX	P35241	583 aa	Known RBP	5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MAGEA9	P43362	315 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ZP1	P60852	638 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TRIM29	Q14134	588 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	GPNMB	Q14956	572 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RBBP5	Q15291	538 aa	Known RBP	5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ZNF284	Q2VY69	593 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ZNF260	Q3ZCT1	412 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	FNBP1L	Q5T0N5	605 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MFSD4B	Q5TF39	518 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TXNDC8	Q6A555	127 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CDC73	Q6P1J9	531 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	LEKR1	Q6ZMV7	388 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CCDC80	Q76M96	950 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HAPLN4	Q86UW8	402 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TTC30B	Q8N4P2	665 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ANKRD20A12P	Q8NF67	263 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CCDC26	Q8TAB7	109 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ETNPPL	Q8TBG4	499 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	BICD2	Q8TD16	824 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PERP	Q96FX8	193 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ANKRD10	Q9NXR5	420 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CLIP2	Q9UDT6	1046 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PTGDR2	Q9Y5Y4	395 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	A3GALT2	U3KPV4	340 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CACNA1E	Q15878	2313 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RTTN	Q86VV8	2226 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ITIH6	Q6UXX5	1313 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	EIF3CL	B5ME19	914 aa	Known RBP	5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	KLK8	O60259	260 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TMEM63A	O94886	807 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	MT-CYB	P00156	380 aa	Predicted RBP	5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CXCL10	P02778	98 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	LCAT	P04180	440 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	IRF1	P10914	325 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ETFA	P13804	333 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CHML	P26374	656 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SHMT1	P34896	483 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PIGA	P37287	484 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PBX3	P40426	434 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	USP8	P40818	1118 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	RXRG	P48443	463 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	FAM27E3	Q08E93	113 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	WASHC5	Q12768	1159 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	KCNC3	Q14003	757 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	FRG1	Q14331	258 aa	Known RBP	5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	MED22	Q15528	200 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SLC45A4	Q5BKX6	768 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	DAB2IP	Q5VWQ8	1189 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	HIST2H2BD	Q6DRA6	164 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ANKRD54	Q6NXT1	300 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CXCL17	Q6UXB2	119 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TMEM184A	Q6ZMB5	413 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	RBM23	Q86U06	439 aa	Known RBP	5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CHCHD4	Q8N4Q1	142 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	MIPOL1	Q8TD10	442 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TCP11	Q8WWU5	503 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	OIT3	Q8WWZ8	545 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ZNF570	Q96NI8	536 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	BAG1	Q99933	345 aa	Predicted RBP	5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CRACR2A	Q9BSW2	395 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TKTL2	Q9H0I9	626 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	RBM38	Q9H0Z9	239 aa	Known RBP	5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PLEKHA4	Q9H4M7	779 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	BRF2	Q9HAW0	419 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	MAGEE1	Q9HCI5	957 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	BPIFA1	Q9NP55	256 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	IL1RAPL2	Q9NP60	686 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SMYD2	Q9NRG4	433 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CYSLTR2	Q9NS75	346 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	KRT84	Q9NSB2	600 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ECHDC1	Q9NTX5	307 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	EXOC1	Q9NV70	894 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	COMMD8	Q9NX08	183 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CPSF2	Q9P2I0	782 aa	Known RBP	5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PCSK1N	Q9UHG2	260 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	HAO1	Q9UJM8	370 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	DBNL	Q9UJU6	430 aa	Known RBP	5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CSMD2	Q7Z408	3487 aa		5.02	□□□□□ -1.61
CACNA1C-223	ENST00000465278	JMJD1C	Q15652	2540 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	STAB1	Q9NY15	2570 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	FAM237B	A0A1B0GVD1	139 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PGPEP1L	A6NFU8	196 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CD8B2	A6NJW9	211 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	INAFM1	C9JVW0	142 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	RGS14	O43566	566 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	RNASEH2A	O75792	299 aa	Known RBP	5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CLEC3B	P05452	202 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TGFB3	P10600	412 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	NAGA	P17050	411 aa		5.01	□□□□□ -1.61
CACNA1C-223	ENST00000465278	GNLY	P22749	145 aa		5.01	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms