RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 UCNP55089 124 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 FRG1Q14331 258 aaKnown RBP12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 SPANXN3Q5MJ09 141 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 PLEKHS1Q5SXH7 462 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 ARMC6Q6NXE6 501 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 FOXR1Q6PIV2 292 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 CES3Q6UWW8 571 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 UNC5DQ6UXZ4 953 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 MICALCLQ6ZW33 695 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 NAT14Q8WUY8 206 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 KLHL6Q8WZ60 621 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 RSC1A1Q92681 617 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 FCRL3Q96P31 734 aaPredicted RBP12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 FERD3LQ96RJ6 166 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 KRT12Q99456 494 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 EBNA1BP2Q99848 306 aaKnown RBP12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 TRIT1Q9H3H1 467 aaKnown RBP12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 LATS2Q9NRM7 1088 aa12.73□□□□□ -0.37
R3HDM1-213ENST00000463230 KMT2BQ9UMN6 2715 aaPredicted RBP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 BHMG1C9JSJ3 638 aaPredicted RBP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 PDHA2P29803 388 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 CCR7P32248 378 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 PREPP48147 710 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 ARL4CP56559 192 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 TUBB2AQ13885 445 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 C17orf53Q8N3J3 647 aaPredicted RBP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 BMPERQ8N8U9 685 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 KCNE4Q8WWG9 221 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 TGM7Q96PF1 710 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 TUBB2BQ9BVA1 445 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 CFAP20Q9Y6A4 193 aaKnown RBP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 PRAMEF33A0A0G2JMD5 474 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 PMS2P1A4D2B8 440 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 TLCD2A6NGC4 264 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 EFCAB7A8K855 629 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 EFCAB8A8MWE9 144 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 FGF3P11487 239 aaPredicted RBP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 SHMT2P34897 504 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 ETV5P41161 510 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 GFERP55789 205 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 PRKAA1Q13131 559 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 DSG2Q14126 1118 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 BROXQ5VW32 411 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 DUS1LQ6P1R4 473 aaKnown RBP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 GALNT7Q86SF2 657 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 LDB1Q86U70 411 aaPredicted RBP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 BPHLQ86WA6 291 aaPredicted RBP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 AGGF1Q8N302 714 aaeCLIP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 RCBTB1Q8NDN9 531 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 LCN9Q8WX39 176 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 USP7Q93009 1102 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 TRIM51Q9BSJ1 452 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 SIDT1Q9NXL6 827 aaKnown RBP12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 SLC39A1Q9NY26 324 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 WHRNQ9P202 907 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 PCDHB11Q9Y5F2 797 aa12.72□□□□□ -0.37
R3HDM1-213ENST00000463230 URB1O60287 2271 aaKnown RBP12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 UBA6A0AVT1 1052 aaPredicted RBP12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 HGFP14210 728 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 ABCG1P45844 678 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 MAPK10P53779 464 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 EIF3BP55884 814 aaKnown RBP12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 DHX9Q08211 1270 aaKnown RBP12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 ILF2Q12905 390 aaKnown RBP12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 CRYMQ14894 314 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 HIF1AQ16665 826 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 DCAF12Q5T6F0 453 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 ZNF470Q6ECI4 717 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 IRGCQ6NXR0 463 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 CEACAM20Q6UY09 585 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 CENPUQ71F23 418 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 OR5K2Q8NHB8 316 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 GSDMBQ8TAX9 411 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 BIRC8Q96P09 236 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 SRMSQ9H3Y6 488 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 C20orf96Q9NUD7 363 aaPredicted RBP12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 HRASLS2Q9NWW9 162 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 CDYLQ9Y232 598 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 ASF1AQ9Y294 204 aa12.71□□□□□ -0.37
R3HDM1-213ENST00000463230 BPTFQ12830 3046 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 PRAMEF10O60809 474 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 S1PR4O95977 384 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 LIPCP11150 499 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 CCL4P13236 92 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 PKMP14618 531 aaKnown RBP12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 ITIH1P19827 911 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 MPSTP25325 297 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 LEPRP48357 1165 aaKnown RBP12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 ITGA8P53708 1063 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 GBX1Q14549 363 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 WHAMMP3Q1A5X7 153 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 CTSL3PQ5NE16 218 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 DNTTIP2Q5QJE6 756 aaKnown RBP12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 SNAP47Q5SQN1 464 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 CACHD1Q5VU97 1274 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 KIAA0408Q6ZU52 694 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 SLC41A2Q96JW4 573 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 ERP44Q9BS26 406 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 PHACTR1Q9C0D0 580 aa12.7□□□□□ -0.38
R3HDM1-213ENST00000463230 TWSG1Q9GZX9 223 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms