RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ZNF582Q96NG8 517 aaPredicted RBP5.56□□□□□ -1.52
COPS3-205ENST00000463097 CMKLR1Q99788 373 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 LMF2Q9BU23 707 aaKnown RBP5.56□□□□□ -1.52
COPS3-205ENST00000463097 ISCUQ9H1K1 167 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 HSD3B7Q9H2F3 369 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 SLA2Q9H6Q3 261 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 CATSPERBQ9H7T0 1116 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 SRD5A3Q9H8P0 318 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 HMG20BQ9P0W2 317 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 ACTR3BQ9P1U1 418 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 SH3BGRL2Q9UJC5 107 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 GMEB2Q9UKD1 530 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 RPH3AQ9Y2J0 694 aaPredicted RBP5.56□□□□□ -1.52
COPS3-205ENST00000463097 LOXL2Q9Y4K0 774 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 INSL6Q9Y581 213 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.56□□□□□ -1.52
COPS3-205ENST00000463097 PRAG1Q86YV5 1406 aa5.56□□□□□ -1.52
COPS3-205ENST00000463097 ZMYM2Q9UBW7 1377 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 A0A087X1B8 175 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 C13orf42A0A1B0GVH6 325 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 SMIM35A0A1B0GVV1 85 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 A0A1W2PPW3 197 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 GOLGA6L9A6NEM1 432 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 DUXAA6NLW8 204 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 TTI1O43156 1089 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 PPIP5K2O43314 1243 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 LUC7L3O95232 432 aaKnown RBP5.55□□□□□ -1.52
COPS3-205ENST00000463097 IGLV2-14P01704 120 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 FGBP02675 491 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 ALPPP05187 535 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 C8orf89P0DMQ9 161 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 ALPPL2P10696 532 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 ARSBP15848 533 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 NAGAP17050 411 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 SERPINB6P35237 376 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 GPC3P51654 580 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 MFAP3P55082 362 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 CRYZQ08257 329 aaKnown RBP5.55□□□□□ -1.52
COPS3-205ENST00000463097 MTX1Q13505 466 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 PDK1Q15118 436 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 SPATS1Q496A3 300 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 GALNT17Q6IS24 598 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 Q6ZSV7 163 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 MIER3Q7Z3K6 550 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 NRARPQ7Z6K4 114 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 PIGWQ7Z7B1 504 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 PHLDB2Q86SQ0 1253 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 MRPL43Q8N983 215 aaKnown RBP5.55□□□□□ -1.52
COPS3-205ENST00000463097 THAP6Q8TBB0 222 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 SLC44A1Q8WWI5 657 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 SLC13A3Q8WWT9 602 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 SMPDL3BQ92485 455 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 SYN2Q92777 582 aaPredicted RBP5.55□□□□□ -1.52
COPS3-205ENST00000463097 SGF29Q96ES7 293 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 SLX1AQ9BQ83 275 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 ZNF747Q9BV97 191 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 LSG1Q9H089 658 aaKnown RBP5.55□□□□□ -1.52
COPS3-205ENST00000463097 LIN28AQ9H9Z2 209 aaKnown RBP5.55□□□□□ -1.52
COPS3-205ENST00000463097 CDH20Q9HBT6 801 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 FZD3Q9NPG1 666 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 DNAJC11Q9NVH1 559 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 SLCO1C1Q9NYB5 712 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 NPAP1Q9NZP6 1156 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 TDRKHQ9Y2W6 561 aaKnown RBP5.55□□□□□ -1.52
COPS3-205ENST00000463097 TRIM17Q9Y577 477 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.55□□□□□ -1.52
COPS3-205ENST00000463097 TEX264Q9Y6I9 313 aa5.55□□□□□ -1.52
COPS3-205ENST00000463097 A0A1W2PP11 408 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 MANSC4A6NHS7 340 aaPredicted RBP5.54□□□□□ -1.52
COPS3-205ENST00000463097 NDC80O14777 642 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 SOX30O94993 753 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 LETM1O95202 739 aaPredicted RBP5.54□□□□□ -1.52
COPS3-205ENST00000463097 IGHV2-70P01814 119 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 PRKCGP05129 697 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 PROZP22891 400 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 MPGP29372 298 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 SLC6A6P31641 620 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 HSD17B3P37058 310 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 PTH2RP49190 550 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 ATXN3P54252 364 aaPredicted RBP5.54□□□□□ -1.52
COPS3-205ENST00000463097 TPD52P55327 224 aaPredicted RBP5.54□□□□□ -1.52
COPS3-205ENST00000463097 UCP2P55851 309 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 SEC61BP60468 96 aaKnown RBP5.54□□□□□ -1.52
COPS3-205ENST00000463097 SLC10A2Q12908 348 aaPredicted RBP5.54□□□□□ -1.52
COPS3-205ENST00000463097 TRA2AQ13595 282 aaKnown RBP eCLIP5.54□□□□□ -1.52
COPS3-205ENST00000463097 CUL3Q13618 768 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 GPR18Q14330 331 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 DAZAP2Q15038 168 aaPredicted RBP5.54□□□□□ -1.52
COPS3-205ENST00000463097 AMZ1Q400G9 498 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 PAPPA-AS1Q5QFB9 102 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.54□□□□□ -1.52
COPS3-205ENST00000463097 PODNL1Q6PEZ8 512 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 ABRAXAS1Q6UWZ7 409 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 TMPRSS11BQ86T26 416 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 ADGRG3Q86Y34 549 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 CHERPQ8IWX8 916 aaKnown RBP5.54□□□□□ -1.52
COPS3-205ENST00000463097 C1orf52Q8N6N3 182 aaKnown RBP5.54□□□□□ -1.52
COPS3-205ENST00000463097 OR5M8Q8NGP6 311 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 OR5R1Q8NH85 324 aa5.54□□□□□ -1.52
COPS3-205ENST00000463097 PPP4R1Q8TF05 950 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms