RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TSPAN33Q86UF1 283 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 PXYLP1Q8TE99 480 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 SLC29A1Q99808 456 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 BBS2Q9BXC9 721 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 TRIM54Q9BYV2 358 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 MRGBPQ9NV56 204 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 RABL2BQ9UNT1 228 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 INSL5Q9Y5Q6 135 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 PRLP01236 227 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 BMP1P13497 986 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 PTGER3P43115 390 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 NKX2-5P52952 324 aaPredicted RBP15.14■□□□□ 0.01
LMNB1-203ENST00000460265 PMS2P3Q13401 168 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 CRY1Q16526 586 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 ZIK1Q3SY52 487 aaPredicted RBP15.14■□□□□ 0.01
LMNB1-203ENST00000460265 IKZF3Q9UKT9 509 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 DHRS12A0PJE2 317 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 SOD2P04179 222 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 MTHFD2P13995 350 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 HMGA1P17096 107 aaKnown RBP15.14■□□□□ 0.01
LMNB1-203ENST00000460265 CAPN3P20807 821 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 MTPNP58546 118 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 CACNG1Q06432 222 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 PPP1R8Q12972 351 aaKnown RBP15.14■□□□□ 0.01
LMNB1-203ENST00000460265 PRKG2Q13237 762 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 SLC8B1Q6J4K2 584 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 STK40Q8N2I9 435 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 CPSF7Q8N684 471 aaKnown RBP15.14■□□□□ 0.01
LMNB1-203ENST00000460265 MAGEE2Q8TD90 523 aaPredicted RBP15.14■□□□□ 0.01
LMNB1-203ENST00000460265 ASB9Q96DX5 294 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 ATOH8Q96SQ7 321 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 TMEM175Q9BSA9 504 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 DERL2Q9GZP9 239 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 ATG10Q9H0Y0 220 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 SLCO3A1Q9UIG8 710 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 CDH7Q9ULB5 785 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 PCDHGA3Q9Y5H0 932 aa15.14■□□□□ 0.01
LMNB1-203ENST00000460265 GSNP06396 782 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 C8AP07357 584 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 FASP25445 335 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 LARP4Q71RC2 724 aaKnown RBP eCLIP15.13■□□□□ 0.01
LMNB1-203ENST00000460265 CARM1Q86X55 608 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 CLEC4FQ8N1N0 589 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 PKD2L2Q9NZM6 624 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 ZNF229Q9UJW7 825 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 ZNF701M0R085 212 aaPredicted RBP15.13■□□□□ 0.01
LMNB1-203ENST00000460265 FFAR2O15552 330 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 ULK1O75385 1050 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 ESR1P03372 595 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 ENDOUP21128 410 aaKnown RBP15.13■□□□□ 0.01
LMNB1-203ENST00000460265 TTKP33981 857 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 HTR6P50406 440 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 POLR2JP52435 117 aaKnown RBP15.13■□□□□ 0.01
LMNB1-203ENST00000460265 ZNF140P52738 457 aaPredicted RBP15.13■□□□□ 0.01
LMNB1-203ENST00000460265 DNASE1L3Q13609 305 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 RAB39AQ14964 217 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 TTLL9Q3SXZ7 439 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 PLPP4Q5VZY2 271 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 RETREG3Q86VR2 466 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 RBFAQ8N0V3 343 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 FBXO30Q8TB52 745 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 SLAMF8Q9P0V8 285 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 KLHL3Q9UH77 587 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 CLEC4EQ9ULY5 219 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 ASB1Q9Y576 335 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 DGKAP23743 735 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 GTF2H2Q13888 395 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 HERC3Q15034 1050 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 FAM209AQ5JX71 171 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 GTF2H2CQ6P1K8 395 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 ADAMTSL2Q86TH1 951 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 RBM23Q86U06 439 aaKnown RBP15.13■□□□□ 0.01
LMNB1-203ENST00000460265 TMEM102Q8N9M5 508 aaPredicted RBP15.13■□□□□ 0.01
LMNB1-203ENST00000460265 LRRC58Q96CX6 371 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 DPY30Q9C005 99 aa15.13■□□□□ 0.01
LMNB1-203ENST00000460265 ZNF334Q9HCZ1 680 aaPredicted RBP15.13■□□□□ 0.01
LMNB1-203ENST00000460265 PRSS51A0A1B0GVH4 220 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 OR2AG2A6NM03 316 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 GUCY1B2O75343 617 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 CLIC3O95833 236 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 UROSP10746 265 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 ITPKAP23677 461 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 CD70P32970 193 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 LIPEQ05469 1076 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 TMC5Q6UXY8 1006 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 CBR4Q8N4T8 237 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 OR4F6Q8NGB9 312 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 ING5Q8WYH8 240 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 ELOVL6Q9H5J4 265 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 MARCH7Q9H992 704 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 TRAV19A0A0A6YYK7 116 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 TNFRSF10AO00220 468 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 DNAJB1P25685 340 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 HNF1BP35680 557 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 CTSOP43234 321 aaPredicted RBP15.12■□□□□ 0.01
LMNB1-203ENST00000460265 SNRPD1P62314 119 aaKnown RBP15.12■□□□□ 0.01
LMNB1-203ENST00000460265 E2F2Q14209 437 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 RFTN1Q14699 578 aaPredicted RBP15.12■□□□□ 0.01
LMNB1-203ENST00000460265 FAAH2Q6GMR7 532 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 EFL1Q7Z2Z2 1120 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms