RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 ILF2Q12905 390 aaKnown RBP15.28■□□□□ 0.04
SDF4-204ENST00000459994 SEMA3AQ14563 771 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 DBN1Q16643 649 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 PLA2G4EQ3MJ16 856 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 LDLRAP1Q5SW96 308 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 GPRC6AQ5T6X5 926 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 RNF187Q5TA31 235 aaPredicted RBP15.28■□□□□ 0.04
SDF4-204ENST00000459994 KIAA1614Q5VZ46 1190 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 ADGRG6Q86SQ4 1221 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 PIM3Q86V86 326 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 DENND6AQ8IWF6 608 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 IQCKQ8N0W5 287 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 SFRP1Q8N474 314 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 OTUD6BQ8N6M0 293 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 PPM1NQ8N819 430 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 DDHD1Q8NEL9 900 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 UHMK1Q8TAS1 419 aaKnown RBP15.28■□□□□ 0.04
SDF4-204ENST00000459994 ANKRD7Q92527 254 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 USP7Q93009 1102 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 DPH1Q9BZG8 443 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 OR2AG1Q9H205 316 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 PPCSQ9HAB8 311 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 INTS10Q9NVR2 710 aaKnown RBP15.28■□□□□ 0.04
SDF4-204ENST00000459994 SCHIP1Q9P0W5 487 aaPredicted RBP15.28■□□□□ 0.04
SDF4-204ENST00000459994 SLC23A2Q9UGH3 650 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 BAHCC1Q9P281 2608 aa15.28■□□□□ 0.04
SDF4-204ENST00000459994 AHCTF1Q8WYP5 2266 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 NUAK1O60285 661 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 NDUFS3O75489 264 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 SLC25A14O95258 325 aaPredicted RBP15.27■□□□□ 0.04
SDF4-204ENST00000459994 JMJD7P0C870 316 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 CSE1LP55060 971 aaKnown RBP15.27■□□□□ 0.04
SDF4-204ENST00000459994 EIF3IQ13347 325 aaKnown RBP15.27■□□□□ 0.04
SDF4-204ENST00000459994 CTBP1Q13363 440 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.27■□□□□ 0.04
SDF4-204ENST00000459994 CRTC3Q6UUV7 619 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 ZFAND4Q86XD8 727 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 PHYKPLQ8IUZ5 450 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 CTAGE3PQ8IX95 158 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 SLC44A1Q8WWI5 657 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 SLC39A7Q92504 469 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 COPS8Q99627 209 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 CPNE1Q99829 537 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 TMEM109Q9BVC6 243 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 PRDM8Q9NQV8 689 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 PCDHGA7Q9Y5G6 932 aa15.27■□□□□ 0.04
SDF4-204ENST00000459994 ATRXP46100 2492 aa15.27■□□□□ 0.03
SDF4-204ENST00000459994 TEX51A0A1B0GUA7 166 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 EXOC1LA0A1B0GW35 172 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 TMX2-CTNND1H3BSU7 103 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 GRID2O43424 1007 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 SNX2O60749 519 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 AHSGP02765 367 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 FGF3P11487 239 aaPredicted RBP15.26■□□□□ 0.03
SDF4-204ENST00000459994 ZNF7P17097 686 aaPredicted RBP15.26■□□□□ 0.03
SDF4-204ENST00000459994 WT1P19544 449 aaPredicted RBP15.26■□□□□ 0.03
SDF4-204ENST00000459994 GABRB3P28472 473 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 GP5P40197 560 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 MLLT3P42568 568 aaPredicted RBP15.26■□□□□ 0.03
SDF4-204ENST00000459994 FASLGP48023 281 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 LIMK2P53671 638 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 ADARP55265 1226 aaKnown RBP15.26■□□□□ 0.03
SDF4-204ENST00000459994 EIF3BP55884 814 aaKnown RBP15.26■□□□□ 0.03
SDF4-204ENST00000459994 VAC14Q08AM6 782 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 CASP8Q14790 479 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 RASA2Q15283 850 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 BROXQ5VW32 411 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 PACS1Q6VY07 963 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 LDB1Q86U70 411 aaPredicted RBP15.26■□□□□ 0.03
SDF4-204ENST00000459994 CNPY4Q8N129 248 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 LPGAT1Q92604 370 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 MCMBPQ9BTE3 642 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 DHRS4Q9BTZ2 278 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 ROPN1BQ9BZX4 212 aaPredicted RBP15.26■□□□□ 0.03
SDF4-204ENST00000459994 SEMA4CQ9C0C4 833 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 ROPN1Q9HAT0 212 aaPredicted RBP15.26■□□□□ 0.03
SDF4-204ENST00000459994 TRIM39Q9HCM9 518 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 WDR70Q9NW82 654 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 KCNK4Q9NYG8 393 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 SLC17A6Q9P2U8 582 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 SLC24A2Q9UI40 661 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 PLAAQ9Y263 795 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 PSAT1Q9Y617 370 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 NFS1Q9Y697 457 aa15.26■□□□□ 0.03
SDF4-204ENST00000459994 CFAP99D6REC4 459 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 K7ENP7 123 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 DYNC1I1O14576 645 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 PRMT5O14744 637 aaPredicted RBP15.25■□□□□ 0.03
SDF4-204ENST00000459994 CHUKO15111 745 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 VEGFDO43915 354 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 PIAS1O75925 651 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 SHBGP04278 402 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 THRAP10827 490 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 RALBP11234 206 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 RPS3P23396 243 aaKnown RBP eCLIP15.25■□□□□ 0.031e-11■■■■■ 30.6
SDF4-204ENST00000459994 NSG1P42857 185 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 MSH2P43246 934 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 GPR3P46089 330 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 CD151P48509 253 aa15.25■□□□□ 0.03
SDF4-204ENST00000459994 MPP1Q00013 466 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms