RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ARNTP27540 789 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 CASQ1P31415 396 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 MRPS25P82663 173 aaKnown RBP18.19■□□□□ 0.5
USP39-209ENST00000458268 GSTM4Q03013 218 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 RPA4Q13156 261 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 SRSF6Q13247 344 aaKnown RBP18.19■□□□□ 0.5
USP39-209ENST00000458268 THOC5Q13769 683 aaKnown RBP18.19■□□□□ 0.5
USP39-209ENST00000458268 KIAA0930Q6ICG6 404 aaPredicted RBP18.19■□□□□ 0.5
USP39-209ENST00000458268 NAT8LQ8N9F0 302 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 MCUQ8NE86 351 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 ACVR1CQ8NER5 493 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 OR52E1Q8NGJ3 308 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 GSDMBQ8TAX9 411 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 OR6C1Q96RD1 312 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 SOHLH2Q9NX45 425 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 CRYL1Q9Y2S2 319 aa18.19■□□□□ 0.5
USP39-209ENST00000458268 B4E171 279 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 STMND1H3BQB6 276 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 POLR1CO15160 346 aaPredicted RBP18.18■□□□□ 0.5
USP39-209ENST00000458268 PFDN6O15212 129 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 TTI1O43156 1089 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 APOA4P06727 396 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 MLNP12872 115 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 CCR7P32248 378 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 TSPAN7P41732 249 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 PTGIRP43119 386 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 RAB15P59190 212 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 MC2RQ01718 297 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 ABRQ12979 859 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 KCNAB1Q14722 419 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 BBS9Q3SYG4 887 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 ANKRD20A4Q4UJ75 823 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 ZNF658BQ4V348 819 aaPredicted RBP18.18■□□□□ 0.5
USP39-209ENST00000458268 MANEAQ5SRI9 462 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 HP1BP3Q5SSJ5 553 aaPredicted RBP18.18■□□□□ 0.5
USP39-209ENST00000458268 RNASEH2BQ5TBB1 312 aaKnown RBP18.18■□□□□ 0.5
USP39-209ENST00000458268 ZNF470Q6ECI4 717 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 CEACAM20Q6UY09 585 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 CCDC81Q6ZN84 652 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 RASGRP3Q8IV61 690 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 SIDT2Q8NBJ9 832 aaKnown RBP18.18■□□□□ 0.5
USP39-209ENST00000458268 PPM1MQ96MI6 270 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 KRT12Q99456 494 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 ASPSCR1Q9BZE9 553 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 TRIT1Q9H3H1 467 aaKnown RBP18.18■□□□□ 0.5
USP39-209ENST00000458268 MVB12BQ9H7P6 319 aa18.18■□□□□ 0.5
USP39-209ENST00000458268 C20orf96Q9NUD7 363 aaPredicted RBP18.18■□□□□ 0.5
USP39-209ENST00000458268 IGHV5-51A0A0C4DH38 117 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 SLC5A10A0PJK1 596 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 FANCGO15287 622 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 ANKRD34CP0C6C1 535 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 CDH3P22223 829 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 CD151P48509 253 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 ATP1A2P50993 1020 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 NEPROQ6NW34 567 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 SYT10Q6XYQ8 523 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 PRSS42Q7Z5A4 293 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 VRK3Q8IV63 474 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 IL22RA1Q8N6P7 574 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 BMPERQ8N8U9 685 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 STAMBPL1Q96FJ0 436 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 PANX3Q96QZ0 392 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 CCNL2Q96S94 520 aaPredicted RBP18.17■□□□□ 0.5
USP39-209ENST00000458268 DDA1Q9BW61 102 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 CARD6Q9BX69 1037 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 KLHL25Q9H0H3 589 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 ZNF768Q9H5H4 540 aaKnown RBP18.17■□□□□ 0.5
USP39-209ENST00000458268 FBXO6Q9NRD1 293 aaPredicted RBP18.17■□□□□ 0.5
USP39-209ENST00000458268 PCYOX1Q9UHG3 505 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 AHCTF1Q8WYP5 2266 aa18.17■□□□□ 0.5
USP39-209ENST00000458268 PTPRQQ9UMZ3 2332 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 FAM237BA0A1B0GVD1 139 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 TLCD2A6NGC4 264 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 BHMG1C9JSJ3 638 aaPredicted RBP18.16■□□□□ 0.5
USP39-209ENST00000458268 NIPSNAP2O75323 286 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 EBLN1P0CF75 366 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 KPNA2P52292 529 aaKnown RBP18.16■□□□□ 0.5
USP39-209ENST00000458268 UCNP55089 124 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 DHX9Q08211 1270 aaKnown RBP18.16■□□□□ 0.5
USP39-209ENST00000458268 PCGF5Q86SE9 256 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 HOOK3Q86VS8 718 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 ZFPM2Q8WW38 1151 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 ASZ1Q8WWH4 475 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 SGSM3Q96HU1 749 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 EPHA6Q9UF33 1036 aa18.16■□□□□ 0.5
USP39-209ENST00000458268 RUVBL2Q9Y230 463 aaKnown RBP18.16■□□□□ 0.5
USP39-209ENST00000458268 TEX51A0A1B0GUA7 166 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 MAGEB16A2A368 324 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 E5RI56 91 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 CCDC188H7C350 402 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 BTN3A3O00478 584 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 BTN3A1O00481 513 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 RAD1O60671 282 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 CHRM3P20309 590 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 CD82P27701 267 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 PLOD1Q02809 727 aaPredicted RBP18.15■□□□□ 0.5
USP39-209ENST00000458268 C2orf54Q08AI8 447 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 CTBP1Q13363 440 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 TUBB3Q13509 450 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 DNAJC21Q5F1R6 531 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms