RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ANXA2P2A6NMY6 339 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 ANXA2P07355 339 aaKnown RBP19.37■□□□□ 0.69
SNX27-204ENST00000458013 ALPIP09923 528 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 PGAM2P15259 253 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 EIF1AXP47813 144 aaKnown RBP19.37■□□□□ 0.69
SNX27-204ENST00000458013 SCAMP5Q8TAC9 235 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 AUTS2Q8WXX7 1259 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 LHX5Q9H2C1 402 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 ZNF358Q9NW07 568 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 MIOSQ9NXC5 875 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 MRPS33Q9Y291 106 aaKnown RBP19.37■□□□□ 0.69
SNX27-204ENST00000458013 VWDEQ8N2E2 1590 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 GPR25O00155 361 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 PAPSS2O95340 614 aaPredicted RBP19.37■□□□□ 0.69
SNX27-204ENST00000458013 TSPAN5P62079 268 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 ZDHHC21Q8IVQ6 265 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 SMG7Q92540 1137 aaKnown RBP19.37■□□□□ 0.69
SNX27-204ENST00000458013 PPP1R14BQ96C90 147 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.37■□□□□ 0.69
SNX27-204ENST00000458013 OR2AG1Q9H205 316 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 AMBNQ9NP70 447 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 DNAAF2Q9NVR5 837 aaKnown RBP19.37■□□□□ 0.69
SNX27-204ENST00000458013 CDC40O60508 579 aaKnown RBP eCLIP19.37■□□□□ 0.69
SNX27-204ENST00000458013 WFS1O76024 890 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 ATF4P18848 351 aaPredicted RBP19.37■□□□□ 0.69
SNX27-204ENST00000458013 TPSB2P20231 275 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 EIF2S3P41091 472 aaKnown RBP19.37■□□□□ 0.69
SNX27-204ENST00000458013 TPSAB1Q15661 275 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 VITQ6UXI7 678 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 RPS27LQ71UM5 84 aaKnown RBP19.37■□□□□ 0.69
SNX27-204ENST00000458013 C1orf127Q8N9H9 656 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 CYB5D2Q8WUJ1 264 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 RWDD3Q9Y3V2 267 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 PCDHB1Q9Y5F3 818 aa19.37■□□□□ 0.69
SNX27-204ENST00000458013 TGDSO95455 350 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 ARCN1P48444 511 aaKnown RBP19.36■□□□□ 0.69
SNX27-204ENST00000458013 PTGES3Q15185 160 aaKnown RBP19.36■□□□□ 0.69
SNX27-204ENST00000458013 CAND1Q86VP6 1230 aaKnown RBP19.36■□□□□ 0.69
SNX27-204ENST00000458013 BARD1Q99728 777 aaKnown RBP19.36■□□□□ 0.69
SNX27-204ENST00000458013 DEC1Q9P2X7 70 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 SYNPO2Q9UMS6 1093 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 A8MU76 341 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 OPN1SWP03999 348 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 PPIBP23284 216 aaKnown RBP19.36■□□□□ 0.69
SNX27-204ENST00000458013 CREB5Q02930 508 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 PPP1R8Q12972 351 aaKnown RBP19.36■□□□□ 0.69
SNX27-204ENST00000458013 OLIG2Q13516 323 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 P2RY8Q86VZ1 359 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 C12orf66Q96MD2 445 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 RAB26Q9ULW5 256 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 PPP3R1P63098 170 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 PGAM4Q8N0Y7 254 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 PARPBPQ9NWS1 579 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 TCRBV7S3A2A0A539 114 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 EIF1AYO14602 144 aaKnown RBP19.36■□□□□ 0.69
SNX27-204ENST00000458013 VBP1P61758 197 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 HMGXB4Q9UGU5 601 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 RPP14O95059 124 aaKnown RBP19.36■□□□□ 0.69
SNX27-204ENST00000458013 ACVR2AP27037 513 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 LCLAT1Q6UWP7 414 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 STRADAQ7RTN6 431 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 HOMEZQ8IX15 550 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 OR13C4Q8NGS5 318 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 TMED9Q9BVK6 235 aa19.36■□□□□ 0.69
SNX27-204ENST00000458013 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.35■□□□□ 0.69
SNX27-204ENST00000458013 TBX18O95935 607 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 COLEC12Q5KU26 742 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 ADGRD1Q6QNK2 874 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 ASGR1P07306 291 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 PSMA1P25786 263 aaKnown RBP19.35■□□□□ 0.69
SNX27-204ENST00000458013 CSKP41240 450 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 SULT2A1Q06520 285 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 TUSC3Q13454 348 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 DEFB115Q30KQ5 88 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 GPR151Q8TDV0 419 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 ARNTL2Q8WYA1 636 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 SLC35G5Q96KT7 338 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 SRMSQ9H3Y6 488 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 MYBPHLA2RUH7 354 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 NFATC2Q13469 925 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 TRMT10BQ6PF06 316 aaKnown RBP19.35■□□□□ 0.69
SNX27-204ENST00000458013 C4orf32Q8N8J7 132 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 CPQQ9Y646 472 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 FAM237AA0A1B0GTK4 181 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 OR6C75A6NL08 312 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 TRMUO75648 421 aaKnown RBP19.35■□□□□ 0.69
SNX27-204ENST00000458013 NDST3O95803 873 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 TGFB1P01137 390 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 CBLP22681 906 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 ACTR3P61158 418 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 GNA12Q03113 381 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 BICRALQ6AI39 1079 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 TCEAL6Q6IPX3 200 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 LRRC52Q8N7C0 313 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 UPF1Q92900 1129 aaKnown RBP eCLIP19.35■□□□□ 0.691e-7■■■■□ 25.4
SNX27-204ENST00000458013 CADM1Q9BY67 442 aaKnown RBP19.35■□□□□ 0.69
SNX27-204ENST00000458013 SDCBP2Q9H190 292 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 IRGMA1A4Y4 181 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 C5orf51A6NDU8 294 aa19.35■□□□□ 0.69
SNX27-204ENST00000458013 KDM4BO94953 1096 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms