RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 P2RY12Q9H244 342 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 PYCARDQ9ULZ3 195 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 SOX13Q9UN79 622 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 BTN3A3O00478 584 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 ATXN7O15265 892 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 PHF2O75151 1096 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 VAPBO95292 243 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 FTH1P02794 183 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 OR56A5P0C7T3 313 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 FGF5P12034 268 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 FOLR1P15328 257 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 IVDP26440 423 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 FNTAP49354 379 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 KPNA2P52292 529 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 PLOD1Q02809 727 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 IL11RAQ14626 422 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 KMT5CQ86Y97 462 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 CREG2Q8IUH2 290 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 ADGRF3Q8IZF5 1079 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 D2HGDHQ8N465 521 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 NAT8LQ8N9F0 302 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 LKAAEAR1Q8TD35 194 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 ELMO1Q92556 727 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 WBP1Q96G27 269 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 SIGLEC10Q96LC7 697 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 BIRC8Q96P09 236 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 CD180Q99467 661 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 TTC1Q99614 292 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 CATSPERZQ9NTU4 200 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 PCDHB11Q9Y5F2 797 aa13.68□□□□□ -0.22
RTFDC1-204ENST00000449062 MAGEB16A2A368 324 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 TLCD2A6NGC4 264 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 IQCF5A8MTL0 148 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 IFRD1O00458 451 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 PRMT5O14744 637 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 RAD1O60671 282 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 RASSF9O75901 435 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 SLCO2B1O94956 709 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 ZNF28P17035 718 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 POLR2CP19387 275 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 RPS3P23396 243 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■□□□□ 9.8
RTFDC1-204ENST00000449062 AOAHP28039 575 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 PTGIRP43119 386 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 TTPAP49638 278 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 RHDQ02161 417 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 PRKG2Q13237 762 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 PLCL1Q15111 1095 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 TMEM135Q86UB9 458 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 VRK3Q8IV63 474 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 SLC22A15Q8IZD6 547 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 CACNA2D3Q8IZS8 1091 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 CARFQ8N187 725 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 OR52E1Q8NGJ3 308 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 OR5AR1Q8NGP9 310 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 LCN9Q8WX39 176 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 SLCO2A1Q92959 643 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 OR6C1Q96RD1 312 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 TRIM56Q9BRZ2 755 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 SLC12A9Q9BXP2 914 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 ZMYND15Q9H091 742 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 PCYOX1Q9UHG3 505 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 POMT2Q9UKY4 750 aa13.67□□□□□ -0.22
RTFDC1-204ENST00000449062 ZCWPW2A0A1B0GU75 182 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 FAM237BA0A1B0GVD1 139 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 SDR42E2A6NKP2 422 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 TK2O00142 265 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 TERTO14746 1132 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 SPAG6O75602 509 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 STK17BO94768 372 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 TCP1P17987 556 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 MAP4P27816 1152 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 PRDX3P30048 256 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 PPARGP37231 505 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 TERF1P54274 439 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 HSD11B2P80365 405 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 SARNPP82979 210 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 FOXM1Q08050 763 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 MAP7Q14244 749 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 GRB7Q14451 532 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 KRT33BQ14525 404 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 KCNAB1Q14722 419 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 BRD3Q15059 726 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 TYSND1Q2T9J0 566 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 ANKRD20A4Q4UJ75 823 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 AARS2Q5JTZ9 985 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 MANEAQ5SRI9 462 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 RNASEH2BQ5TBB1 312 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 KIAA1614Q5VZ46 1190 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 KIAA0930Q6ICG6 404 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 ZNF449Q6P9G9 518 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 FBXO38Q6PIJ6 1188 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 OOSP2Q86WS3 158 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 TBC1D21Q8IYX1 336 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 FLVCR1-AS1Q8TAF5 88 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 LPGAT1Q92604 370 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 SERPINB12Q96P63 405 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 FCRL4Q96PJ5 515 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms