RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PRMT5O14744 637 aaPredicted RBP12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 NDUFS3O75489 264 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 MLNP12872 115 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 CSE1LP55060 971 aaKnown RBP12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 DNTTIP2Q5QJE6 756 aaKnown RBP12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 MANEAQ5SRI9 462 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 ARMC6Q6NXE6 501 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 TIPARPQ7Z3E1 657 aaKnown RBP12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 CREG2Q8IUH2 290 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 KRT222Q8N1A0 295 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 NAT8LQ8N9F0 302 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 OR52E1Q8NGJ3 308 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 OR5AR1Q8NGP9 310 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 LKAAEAR1Q8TD35 194 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 UBXN4Q92575 508 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 SLC41A2Q96JW4 573 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 CAPZA3Q96KX2 299 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 PPM1MQ96MI6 270 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 BBC3Q96PG8 261 aaPredicted RBP12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 OR6C1Q96RD1 312 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 CD180Q99467 661 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 ZPBPQ9BS86 351 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 P2RY12Q9H244 342 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 TFB2MQ9H5Q4 396 aaKnown RBP12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 CDYLQ9Y232 598 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 NBEAQ8NFP9 2946 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 FAM237BA0A1B0GVD1 139 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 UBA6A0AVT1 1052 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 TLCD2A6NGC4 264 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 BTN3A3O00478 584 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 RAD1O60671 282 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 GPC4O75487 556 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 TPBGLP0DKB5 382 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 FOLR1P15328 257 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 WT1P19544 449 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 AOAHP28039 575 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 PTGIRP43119 386 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 MAGEA3P43357 314 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 ATP1A2P50993 1020 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 KPNA2P52292 529 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 PLOD1Q02809 727 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 HSPA14Q0VDF9 509 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 IL11RAQ14626 422 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 KCNAB1Q14722 419 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 PPP1R7Q15435 360 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 SYTL3Q4VX76 610 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 ARMC3Q5W041 872 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 PTRHD1Q6GMV3 140 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 KIAA0930Q6ICG6 404 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 CASC4Q6P4E1 433 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 FBXO38Q6PIJ6 1188 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 SDCCAG8Q86SQ7 713 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 VRK3Q8IV63 474 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 PPIL6Q8IXY8 311 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 SLC22A15Q8IZD6 547 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 CACNA2D3Q8IZS8 1091 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 AGGF1Q8N302 714 aaeCLIP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 OTUD6BQ8N6M0 293 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 ASZ1Q8WWH4 475 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 RNF31Q96EP0 1072 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 ELMO2Q96JJ3 720 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 SERPINB12Q96P63 405 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 NAPGQ99747 312 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 HGH1Q9BTY7 390 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 TSSK1BQ9BXA7 367 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 XKR8Q9H6D3 395 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 PCYOX1Q9UHG3 505 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 ASF1AQ9Y294 204 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 TMEM184BQ9Y519 407 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 SAR1BQ9Y6B6 198 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 CHD6Q8TD26 2715 aa12.38□□□□□ -0.43
PRPF40A-203ENST00000448428 FAM208BQ5VWN6 2430 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 CTAGE9A4FU28 777 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 BTN3A1O00481 513 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 FANCGO15287 622 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 STK17BO94768 372 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 SLCO2B1O94956 709 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 EBLN1P0CF75 366 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 FGF5P12034 268 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 ZNF28P17035 718 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 RPS3P23396 243 aaKnown RBP eCLIP12.37□□□□□ -0.433e-6■□□□□ 11.1
PRPF40A-203ENST00000448428 IVDP26440 423 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 PRDX3P30048 256 aaKnown RBP12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 FMO4P31512 558 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 HSD11B2P80365 405 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 ABRQ12979 859 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 PRKAA1Q13131 559 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 ANKRD20A4Q4UJ75 823 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 RNASEH2BQ5TBB1 312 aaKnown RBP12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 KIAA1614Q5VZ46 1190 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 MRNIPQ6NTE8 343 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 NEPROQ6NW34 567 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 TMEM135Q86UB9 458 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 AMIGO1Q86WK6 493 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 LRRC6Q86X45 466 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 KMT5CQ86Y97 462 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 TBC1D21Q8IYX1 336 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 ADGRF3Q8IZF5 1079 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms