RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 TFB2MQ9H5Q4 396 aaKnown RBP20.17■□□□□ 0.82
SDC1-205ENST00000447124 CASS4Q9NQ75 786 aa20.17■□□□□ 0.82
SDC1-205ENST00000447124 POMT2Q9UKY4 750 aa20.17■□□□□ 0.82
SDC1-205ENST00000447124 ERI2A8K979 691 aaKnown RBP20.16■□□□□ 0.82
SDC1-205ENST00000447124 BTN3A1O00481 513 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 PRDX3P30048 256 aaKnown RBP20.16■□□□□ 0.82
SDC1-205ENST00000447124 RPA4Q13156 261 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 PRKG2Q13237 762 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 DNASE1L3Q13609 305 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 BOP1Q14137 746 aaKnown RBP20.16■□□□□ 0.82
SDC1-205ENST00000447124 ERV3-1Q14264 604 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 ITIH4Q14624 930 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 TSTD2Q5T7W7 516 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 PRAMEF17Q5VTA0 474 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 FAM199XQ6PEV8 388 aaPredicted RBP20.16■□□□□ 0.82
SDC1-205ENST00000447124 NAPRTQ6XQN6 538 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 SLC38A9Q8NBW4 561 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 OR52E1Q8NGJ3 308 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 UBE2Q2Q8WVN8 375 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 TFGQ92734 400 aaPredicted RBP20.16■□□□□ 0.82
SDC1-205ENST00000447124 SRMSQ9H3Y6 488 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 XKR8Q9H6D3 395 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 MVB12BQ9H7P6 319 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 RAB6BQ9NRW1 208 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 KCND1Q9NSA2 647 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 BTRCQ9Y297 605 aa20.16■□□□□ 0.82
SDC1-205ENST00000447124 HEMK1Q9Y5R4 338 aaPredicted RBP20.16■□□□□ 0.82
SDC1-205ENST00000447124 IFRD1O00458 451 aaPredicted RBP20.15■□□□□ 0.82
SDC1-205ENST00000447124 ARHGAP6O43182 974 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 OR1I1O60431 355 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 GOT2P00505 430 aaKnown RBP20.15■□□□□ 0.82
SDC1-205ENST00000447124 MT-ND3P03897 115 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 TPBGLP0DKB5 382 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 ADRA1DP25100 572 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 ACADLP28330 430 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 RPL22P35268 128 aaKnown RBP20.15■□□□□ 0.82
SDC1-205ENST00000447124 NSG1P42857 185 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 GSDMDP57764 484 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 TUBB4BP68371 445 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 SEMA5AQ13591 1074 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 TUBB2AQ13885 445 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 ZNF534Q76KX8 674 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 TMEM135Q86UB9 458 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 PTRH1Q86Y79 214 aaKnown RBP20.15■□□□□ 0.82
SDC1-205ENST00000447124 CARFQ8N187 725 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 RANBP9Q96S59 729 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 TUBB2BQ9BVA1 445 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 C1GALT1Q9NS00 363 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 TUBD1Q9UJT1 453 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 RIMKLBQ9ULI2 386 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 PCDHGA6Q9Y5G7 932 aa20.15■□□□□ 0.82
SDC1-205ENST00000447124 SLC5A10A0PJK1 596 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 HEATR9A2RTY3 570 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 BHMG1C9JSJ3 638 aaPredicted RBP20.14■□□□□ 0.81
SDC1-205ENST00000447124 GSTM1P09488 218 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 CDH3P22223 829 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 LMAN1P49257 510 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 GSTM4Q03013 218 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 ACVR1Q04771 509 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 PRKAA1Q13131 559 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 BRD3Q15059 726 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 CCNG2Q16589 344 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 KCTD19Q17RG1 926 aaPredicted RBP20.14■□□□□ 0.81
SDC1-205ENST00000447124 CYB5D1Q6P9G0 228 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 PACS1Q6VY07 963 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 PPP1R21Q6ZMI0 780 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 ADGRF3Q8IZF5 1079 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 APOBEC4Q8WW27 367 aaKnown RBP20.14■□□□□ 0.81
SDC1-205ENST00000447124 TRIM4Q9C037 500 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 VPS37BQ9H9H4 285 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 KCND3Q9UK17 655 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 DRG1Q9Y295 367 aaKnown RBP20.14■□□□□ 0.81
SDC1-205ENST00000447124 KCNMB2Q9Y691 235 aa20.14■□□□□ 0.81
SDC1-205ENST00000447124 GSAPA4D1B5 854 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 GOLGA6L6A8MZA4 724 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 LIN7AO14910 233 aaPredicted RBP20.13■□□□□ 0.81
SDC1-205ENST00000447124 CREG1O75629 220 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 ST6GAL1P15907 406 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 GPS2Q13227 327 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 SEMA3AQ14563 771 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 TMTC4Q5T4D3 741 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 LCN10Q6JVE6 187 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 ZNF662Q6ZS27 426 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 AMIGO1Q86WK6 493 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 OR5AR1Q8NGP9 310 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 ELMO1Q92556 727 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 ABHD17AQ96GS6 310 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 HGH1Q9BTY7 390 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 TLR10Q9BXR5 811 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 KLHL25Q9H0H3 589 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 LZTFL1Q9NQ48 299 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 ZNF71Q9NQZ8 489 aaPredicted RBP20.13■□□□□ 0.81
SDC1-205ENST00000447124 PAK5Q9P286 719 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 PCDHB3Q9Y5E6 796 aa20.13■□□□□ 0.81
SDC1-205ENST00000447124 PIPSLA2A3N6 862 aa20.12■□□□□ 0.81
SDC1-205ENST00000447124 E7EVH7 732 aa20.12■□□□□ 0.81
SDC1-205ENST00000447124 SCRG1O75711 98 aa20.12■□□□□ 0.81
SDC1-205ENST00000447124 WISP1O95388 367 aa20.12■□□□□ 0.81
SDC1-205ENST00000447124 PVRP15151 417 aa20.12■□□□□ 0.81
SDC1-205ENST00000447124 LAMB3Q13751 1172 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms