RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 BCAP29Q9UHQ4 241 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 CROCCQ5TZA2 2017 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 ZSCAN9O15535 394 aaPredicted RBP16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 CTSLP07711 333 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 UQCRBP14927 111 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 SPINT3P49223 89 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 RPL26P61254 145 aaKnown RBP16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 ERVK-8P63133 956 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 CAMK1Q14012 370 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 GRIN2CQ14957 1233 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 XKR7Q5GH72 579 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 GFM2Q969S9 779 aaKnown RBP16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 RHBDF1Q96CC6 855 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 VCXQ9H320 206 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 ERVW-1Q9UQF0 538 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 OTCP00480 354 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 ABRQ12979 859 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 TLR1Q15399 786 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 TTLL9Q3SXZ7 439 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 OGFRL1Q5TC84 451 aaPredicted RBP16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 PIP4K2CQ8TBX8 421 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 PROKR1Q8TCW9 393 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 ELMO1Q92556 727 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 C6orf203Q9P0P8 240 aaPredicted RBP16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 ZNF490Q9ULM2 529 aaPredicted RBP16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 MAGEA13PA6NCF6 341 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 PREPP48147 710 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 LBX1P52954 281 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 CDKL1Q00532 357 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 CWF19L1Q69YN2 538 aaKnown RBP16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 CDC26Q8NHZ8 85 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 GATA6Q92908 595 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 SLCO4A1Q96BD0 722 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 CD300AQ9UGN4 299 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 PTBP2Q9UKA9 531 aaKnown RBP16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 OARD1Q9Y530 152 aa16.48■□□□□ 0.23
LAPTM4B-201ENST00000445593 LTBP2Q14767 1821 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 TRBV5-4A0A0C4DH59 114 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 LINC01553A4QN01 128 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 SEC22BO75396 215 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 OXTRP30559 389 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 NNMTP40261 264 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 DDX39BQ13838 428 aaKnown RBP16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 IYDQ6PHW0 289 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 ELMSAN1Q6PJG2 1045 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 CYP20A1Q6UW02 462 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 KRTCAP2Q8N6L1 136 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 SEPHS2Q99611 448 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 NUSAP1Q9BXS6 441 aaKnown RBP16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 CD244Q9BZW8 370 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 PDE10AQ9Y233 779 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 TNPO3Q9Y5L0 923 aaKnown RBP16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 WASH3PC4AMC7 463 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 EPB42P16452 691 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 RPS3P23396 243 aaKnown RBP eCLIP16.47■□□□□ 0.238e-8■■■□□ 17.4
LAPTM4B-201ENST00000445593 ATP4BP51164 291 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 PDK3Q15120 406 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 GPR33Q49SQ1 333 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 MACC1Q6ZN28 852 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 STON2Q8WXE9 905 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 ECHDC3Q96DC8 303 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 HEPHQ9BQS7 1158 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 FAM83DQ9H4H8 585 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 CNOT6Q9ULM6 557 aaKnown RBP16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 DENND4CQ5VZ89 1909 aa16.47■□□□□ 0.23
LAPTM4B-201ENST00000445593 PRSS51A0A1B0GVH4 220 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 A0A1W2PP18 115 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 PABPN1LA6NDY0 278 aaKnown RBP16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 STK16O75716 305 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 WDR47O94967 919 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 LRATO95237 230 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 B3GALT4O96024 378 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 OR56A5P0C7T3 313 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 ACOX1Q15067 660 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 PCBP2Q15366 365 aaKnown RBP eCLIP16.46■□□□□ 0.235e-11■■■■■ 44
LAPTM4B-201ENST00000445593 GSTA3Q16772 222 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 ZFP1Q6P2D0 407 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 KIAA2013Q8IYS2 634 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 OCEL1Q9H607 264 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 COQ10BQ9H8M1 238 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 GID8Q9NWU2 228 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 AP4B1Q9Y6B7 739 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 F5P12259 2224 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 PDLIM1O00151 329 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 ULK1O75385 1050 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 PGM3O95394 542 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 CSNK1DP48730 415 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 RHDQ02161 417 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 LIPEQ05469 1076 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 SELPLGQ14242 412 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 ZNF77Q15935 545 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 ZXDCQ2QGD7 858 aaPredicted RBP16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 ADGRD2Q7Z7M1 963 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 PDPRQ8NCN5 879 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 RSPRY1Q96DX4 576 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 C1QTNF3Q9BXJ4 246 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 KCTD5Q9NXV2 234 aa16.46■□□□□ 0.23
LAPTM4B-201ENST00000445593 LSM1O15116 133 aaKnown RBP16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 GSK3BP49841 420 aa16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 ILF2Q12905 390 aaKnown RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms