RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 ZNF18P17022 549 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 MX1P20591 662 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ITGAXP20702 1163 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF10P21506 573 aaPredicted RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 DGKAP23743 735 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 UCP1P25874 307 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CD27P26842 260 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PSMB6P28072 239 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CHI3L1P36222 383 aaPredicted RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CPOXP36551 454 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PBX3P40426 434 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SLC1A1P43005 524 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 NAMPTP43490 491 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 GSTM5P46439 218 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 BRCC3P46736 316 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SLC6A12P48065 614 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ALDH3B2P48448 385 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CDC34P49427 236 aaPredicted RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 NDUFV1P49821 464 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CCR4P51679 360 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF157P51786 506 aaPredicted RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 HNRNPFP52597 415 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 C21orf59P57076 290 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 AP3S2P59780 193 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 RAB11AP62491 216 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 IL9RQ01113 521 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 GALK2Q01415 458 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 HSF2Q03933 536 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 OCA2Q04671 838 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PRKCQQ04759 706 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF33AQ06730 810 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 TNK2Q07912 1038 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 MGAT2Q10469 447 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 KCNMA1Q12791 1236 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 MTAPQ13126 283 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 BFSP2Q13515 415 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ATP1A4Q13733 1029 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ENPP2Q13822 863 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 RCAN2Q14206 197 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SMCO1Q147U7 214 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 MFSD13AQ14CX5 517 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 EMC2Q15006 297 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PON3Q15166 354 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 RAB11BQ15907 218 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ADRM1Q16186 407 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 GPR162Q16538 588 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 KYAT1Q16773 422 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CA9Q16790 459 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 TATDN3Q17R31 274 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PNLIPRP3Q17RR3 467 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 NDUFAF6Q330K2 333 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 LINC01559Q495D7 138 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CERKLQ49MI3 558 aaPredicted RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PDLIM3Q53GG5 364 aaPredicted RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 BEX5Q5H9J7 111 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CDKL4Q5MAI5 379 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 BRMS1LQ5PSV4 323 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CCNYL2Q5T2Q4 361 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 BEND3Q5T5X7 828 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CPZQ66K79 652 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SEL1L3Q68CR1 1132 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 DENND2CQ68D51 928 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ANKS6Q68DC2 871 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SLFN12LQ6IEE8 588 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ESRP1Q6NXG1 681 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 LRFN4Q6PJG9 635 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CCDC137Q6PK04 289 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ADAMTSL4Q6UY14 1074 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 GADL1Q6ZQY3 521 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 KIAA0408Q6ZU52 694 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 NDUFAF7Q7L592 441 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SSX9Q7RTT3 188 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PAGE2Q7Z2X7 111 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PRSS42Q7Z5A4 293 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 KMT5CQ86Y97 462 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 HIPK1Q86Z02 1210 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 IRF2BP1Q8IU81 584 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 RBM45Q8IUH3 476 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SERPINA12Q8IW75 414 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CCDC28AQ8IWP9 274 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 NELFCDQ8IXH7 590 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 MMP21Q8N119 569 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 THEM5Q8N1Q8 247 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 KIF2BQ8N4N8 673 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ANKRD13CQ8N6S4 541 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CCDC185Q8N715 623 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 RNF148Q8N7C7 305 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 C12orf29Q8N999 325 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 KREMEN2Q8NCW0 462 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 STKLD1Q8NE28 680 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 FBXL13Q8NEE6 735 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 DNAAF1Q8NEP3 725 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 C17orf47Q8NEP4 570 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 OR4K14Q8NGD5 310 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SNIP1Q8TAD8 396 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PIWIL2Q8TC59 973 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 MCOLN3Q8TDD5 553 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SETD7Q8WTS6 366 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 NUDT8Q8WV74 236 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms